Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
MRM3Q9HC36 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.53■■□□□ 1.04
MRM3Q9HC36 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MRM3Q9HC36 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
MRM3Q9HC36 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.52■■□□□ 1.04
MRM3Q9HC36 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.52■■□□□ 1.04
MRM3Q9HC36 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.52■■□□□ 1.04
MRM3Q9HC36 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
MRM3Q9HC36 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MRM3Q9HC36 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MRM3Q9HC36 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.52■■□□□ 1.04
MRM3Q9HC36 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
MRM3Q9HC36 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MRM3Q9HC36 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.52■■□□□ 1.04
MRM3Q9HC36 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
MRM3Q9HC36 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
MRM3Q9HC36 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
MRM3Q9HC36 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MRM3Q9HC36 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MRM3Q9HC36 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MRM3Q9HC36 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
MRM3Q9HC36 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.51■■□□□ 1.03
MRM3Q9HC36 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
MRM3Q9HC36 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.51■■□□□ 1.03
MRM3Q9HC36 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.51■■□□□ 1.03
MRM3Q9HC36 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.51■■□□□ 1.03
MRM3Q9HC36 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MRM3Q9HC36 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MRM3Q9HC36 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
MRM3Q9HC36 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MRM3Q9HC36 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.51■■□□□ 1.03
MRM3Q9HC36 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MRM3Q9HC36 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MRM3Q9HC36 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MRM3Q9HC36 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.5■■□□□ 1.03
MRM3Q9HC36 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MRM3Q9HC36 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.5■■□□□ 1.03
MRM3Q9HC36 AC026310.3-201ENST00000625186 2373 ntBASIC21.5■■□□□ 1.03
MRM3Q9HC36 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MRM3Q9HC36 MIR638-201ENST00000385237 100 ntBASIC21.5■■□□□ 1.03
MRM3Q9HC36 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.5■■□□□ 1.03
MRM3Q9HC36 IGHV3-19-201ENST00000521488 291 ntBASIC21.5■■□□□ 1.03
MRM3Q9HC36 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MRM3Q9HC36 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
MRM3Q9HC36 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.5■■□□□ 1.03
MRM3Q9HC36 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.5■■□□□ 1.03
MRM3Q9HC36 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MRM3Q9HC36 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MRM3Q9HC36 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.49■■□□□ 1.03
MRM3Q9HC36 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.49■■□□□ 1.03
MRM3Q9HC36 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MRM3Q9HC36 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MRM3Q9HC36 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.49■■□□□ 1.03
MRM3Q9HC36 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MRM3Q9HC36 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
MRM3Q9HC36 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MRM3Q9HC36 AC096631.2-201ENST00000436136 790 ntBASIC21.49■■□□□ 1.03
MRM3Q9HC36 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.49■■□□□ 1.03
MRM3Q9HC36 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.49■■□□□ 1.03
MRM3Q9HC36 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.49■■□□□ 1.03
MRM3Q9HC36 SMUG1P1-201ENST00000590640 811 ntBASIC21.49■■□□□ 1.03
MRM3Q9HC36 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.49■■□□□ 1.03
MRM3Q9HC36 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.49■■□□□ 1.03
MRM3Q9HC36 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
MRM3Q9HC36 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.49■■□□□ 1.03
MRM3Q9HC36 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
MRM3Q9HC36 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.49■■□□□ 1.03
MRM3Q9HC36 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
MRM3Q9HC36 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.48■■□□□ 1.03
MRM3Q9HC36 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
MRM3Q9HC36 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
MRM3Q9HC36 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.48■■□□□ 1.03
MRM3Q9HC36 AC126544.1-201ENST00000580842 1059 ntBASIC21.48■■□□□ 1.03
MRM3Q9HC36 AC106739.1-201ENST00000617035 715 ntBASIC21.48■■□□□ 1.03
MRM3Q9HC36 AC110285.6-201ENST00000617652 491 ntBASIC21.48■■□□□ 1.03
MRM3Q9HC36 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MRM3Q9HC36 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MRM3Q9HC36 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MRM3Q9HC36 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.48■■□□□ 1.03
MRM3Q9HC36 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.48■■□□□ 1.03
MRM3Q9HC36 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MRM3Q9HC36 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
MRM3Q9HC36 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MRM3Q9HC36 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
MRM3Q9HC36 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.47■■□□□ 1.03
MRM3Q9HC36 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MRM3Q9HC36 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.47■■□□□ 1.03
MRM3Q9HC36 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.47■■□□□ 1.03
MRM3Q9HC36 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MRM3Q9HC36 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MRM3Q9HC36 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.47■■□□□ 1.03
MRM3Q9HC36 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MRM3Q9HC36 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.47■■□□□ 1.03
MRM3Q9HC36 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
MRM3Q9HC36 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MRM3Q9HC36 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
MRM3Q9HC36 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
MRM3Q9HC36 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MRM3Q9HC36 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
MRM3Q9HC36 PBX2P1-201ENST00000493219 1291 ntBASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms