Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SP110Q9HB58 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SP110Q9HB58 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SP110Q9HB58 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SP110Q9HB58 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.99■■□□□ 1.11
SP110Q9HB58 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SP110Q9HB58 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SP110Q9HB58 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SP110Q9HB58 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SP110Q9HB58 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SP110Q9HB58 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
SP110Q9HB58 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.98■■□□□ 1.11
SP110Q9HB58 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SP110Q9HB58 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.98■■□□□ 1.11
SP110Q9HB58 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.98■■□□□ 1.11
SP110Q9HB58 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SP110Q9HB58 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
SP110Q9HB58 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.98■■□□□ 1.11
SP110Q9HB58 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.98■■□□□ 1.11
SP110Q9HB58 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SP110Q9HB58 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SP110Q9HB58 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SP110Q9HB58 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SP110Q9HB58 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SP110Q9HB58 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SP110Q9HB58 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SP110Q9HB58 PKD1P6-201ENST00000343738 4769 ntBASIC21.97■■□□□ 1.11
SP110Q9HB58 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
SP110Q9HB58 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
SP110Q9HB58 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SP110Q9HB58 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SP110Q9HB58 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.96■■□□□ 1.11
SP110Q9HB58 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.96■■□□□ 1.11
SP110Q9HB58 BX005040.4-201ENST00000637145 1518 ntBASIC21.96■■□□□ 1.11
SP110Q9HB58 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SP110Q9HB58 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.96■■□□□ 1.11
SP110Q9HB58 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SP110Q9HB58 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SP110Q9HB58 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.96■■□□□ 1.11
SP110Q9HB58 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SP110Q9HB58 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SP110Q9HB58 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
SP110Q9HB58 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.96■■□□□ 1.11
SP110Q9HB58 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SP110Q9HB58 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.96■■□□□ 1.11
SP110Q9HB58 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.96■■□□□ 1.11
SP110Q9HB58 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.96■■□□□ 1.11
SP110Q9HB58 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SP110Q9HB58 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SP110Q9HB58 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.11
SP110Q9HB58 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SP110Q9HB58 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.95■■□□□ 1.1
SP110Q9HB58 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.95■■□□□ 1.1
SP110Q9HB58 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SP110Q9HB58 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.95■■□□□ 1.1
SP110Q9HB58 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.95■■□□□ 1.1
SP110Q9HB58 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.95■■□□□ 1.1
SP110Q9HB58 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.95■■□□□ 1.1
SP110Q9HB58 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SP110Q9HB58 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SP110Q9HB58 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SP110Q9HB58 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SP110Q9HB58 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SP110Q9HB58 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SP110Q9HB58 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SP110Q9HB58 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.94■■□□□ 1.1
SP110Q9HB58 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SP110Q9HB58 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SP110Q9HB58 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SP110Q9HB58 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
SP110Q9HB58 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SP110Q9HB58 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SP110Q9HB58 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SP110Q9HB58 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SP110Q9HB58 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SP110Q9HB58 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SP110Q9HB58 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SP110Q9HB58 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SP110Q9HB58 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SP110Q9HB58 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.94■■□□□ 1.1
SP110Q9HB58 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SP110Q9HB58 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.94■■□□□ 1.1
SP110Q9HB58 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SP110Q9HB58 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.93■■□□□ 1.1
SP110Q9HB58 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SP110Q9HB58 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
SP110Q9HB58 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
SP110Q9HB58 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SP110Q9HB58 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SP110Q9HB58 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SP110Q9HB58 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SP110Q9HB58 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SP110Q9HB58 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SP110Q9HB58 FAM99A-202ENST00000538190 1989 ntBASIC21.92■■□□□ 1.1
SP110Q9HB58 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SP110Q9HB58 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SP110Q9HB58 C11orf96-202ENST00000528572 1834 ntBASIC21.92■■□□□ 1.1
SP110Q9HB58 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SP110Q9HB58 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SP110Q9HB58 AC009237.3-201ENST00000393279 1427 ntBASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms