Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
NSUN3Q9H649 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
NSUN3Q9H649 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
NSUN3Q9H649 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.84■■□□□ 1.25
NSUN3Q9H649 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.84■■□□□ 1.25
NSUN3Q9H649 RARRES2P4-201ENST00000514074 484 ntBASIC22.84■■□□□ 1.25
NSUN3Q9H649 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.84■■□□□ 1.25
NSUN3Q9H649 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.84■■□□□ 1.25
NSUN3Q9H649 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.84■■□□□ 1.25
NSUN3Q9H649 AC092118.2-201ENST00000613495 667 ntBASIC22.84■■□□□ 1.25
NSUN3Q9H649 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
NSUN3Q9H649 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.83■■□□□ 1.25
NSUN3Q9H649 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.83■■□□□ 1.25
NSUN3Q9H649 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.83■■□□□ 1.25
NSUN3Q9H649 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.83■■□□□ 1.25
NSUN3Q9H649 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC22.83■■□□□ 1.25
NSUN3Q9H649 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
NSUN3Q9H649 OR10C1-204ENST00000622521 1039 ntBASIC22.83■■□□□ 1.25
NSUN3Q9H649 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.83■■□□□ 1.25
NSUN3Q9H649 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.83■■□□□ 1.25
NSUN3Q9H649 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
NSUN3Q9H649 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.83■■□□□ 1.24
NSUN3Q9H649 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
NSUN3Q9H649 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NSUN3Q9H649 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
NSUN3Q9H649 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NSUN3Q9H649 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NSUN3Q9H649 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NSUN3Q9H649 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NSUN3Q9H649 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
NSUN3Q9H649 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
NSUN3Q9H649 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NSUN3Q9H649 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
NSUN3Q9H649 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
NSUN3Q9H649 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
NSUN3Q9H649 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.81■■□□□ 1.24
NSUN3Q9H649 GCSHP5-201ENST00000443090 522 ntBASIC22.81■■□□□ 1.24
NSUN3Q9H649 AC007322.4-201ENST00000509611 723 ntBASIC22.81■■□□□ 1.24
NSUN3Q9H649 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.81■■□□□ 1.24
NSUN3Q9H649 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
NSUN3Q9H649 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.81■■□□□ 1.24
NSUN3Q9H649 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
NSUN3Q9H649 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.81■■□□□ 1.24
NSUN3Q9H649 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
NSUN3Q9H649 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
NSUN3Q9H649 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
NSUN3Q9H649 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
NSUN3Q9H649 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
NSUN3Q9H649 LINC00543-201ENST00000567234 1845 ntBASIC22.8■■□□□ 1.24
NSUN3Q9H649 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
NSUN3Q9H649 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
NSUN3Q9H649 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.8■■□□□ 1.24
NSUN3Q9H649 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
NSUN3Q9H649 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
NSUN3Q9H649 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
NSUN3Q9H649 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.8■■□□□ 1.24
NSUN3Q9H649 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.8■■□□□ 1.24
NSUN3Q9H649 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.8■■□□□ 1.24
NSUN3Q9H649 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.8■■□□□ 1.24
NSUN3Q9H649 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.8■■□□□ 1.24
NSUN3Q9H649 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
NSUN3Q9H649 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
NSUN3Q9H649 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NSUN3Q9H649 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NSUN3Q9H649 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NSUN3Q9H649 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
NSUN3Q9H649 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.79■■□□□ 1.24
NSUN3Q9H649 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
NSUN3Q9H649 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
NSUN3Q9H649 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.79■■□□□ 1.24
NSUN3Q9H649 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.79■■□□□ 1.24
NSUN3Q9H649 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.79■■□□□ 1.24
NSUN3Q9H649 AC008694.1-202ENST00000636953 945 ntBASIC22.79■■□□□ 1.24
NSUN3Q9H649 DUSP8P5-201ENST00000422884 1815 ntBASIC22.79■■□□□ 1.24
NSUN3Q9H649 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
NSUN3Q9H649 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
NSUN3Q9H649 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NSUN3Q9H649 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NSUN3Q9H649 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
NSUN3Q9H649 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.78■■□□□ 1.24
NSUN3Q9H649 ESRRAP1-201ENST00000400596 1257 ntBASIC22.78■■□□□ 1.24
NSUN3Q9H649 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.78■■□□□ 1.24
NSUN3Q9H649 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.78■■□□□ 1.24
NSUN3Q9H649 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.78■■□□□ 1.24
NSUN3Q9H649 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.78■■□□□ 1.24
NSUN3Q9H649 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.78■■□□□ 1.24
NSUN3Q9H649 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
NSUN3Q9H649 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
NSUN3Q9H649 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
NSUN3Q9H649 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.78■■□□□ 1.24
NSUN3Q9H649 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
NSUN3Q9H649 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
NSUN3Q9H649 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
NSUN3Q9H649 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
NSUN3Q9H649 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
NSUN3Q9H649 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.77■■□□□ 1.24
NSUN3Q9H649 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.77■■□□□ 1.24
NSUN3Q9H649 AL512625.2-201ENST00000417533 625 ntBASIC22.77■■□□□ 1.24
NSUN3Q9H649 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.77■■□□□ 1.24
NSUN3Q9H649 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms