Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.56■■□□□ 1.04
CLPBQ9H078 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLPBQ9H078 LINC02228-203ENST00000641970 1355 ntBASIC21.56■■□□□ 1.04
CLPBQ9H078 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CLPBQ9H078 EP400NL-214ENST00000641289 2402 ntBASIC21.56■■□□□ 1.04
CLPBQ9H078 LINC00526-201ENST00000581067 1875 ntBASIC21.56■■□□□ 1.04
CLPBQ9H078 AC139530.1-201ENST00000575312 1977 ntBASIC21.56■■□□□ 1.04
CLPBQ9H078 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLPBQ9H078 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLPBQ9H078 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLPBQ9H078 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLPBQ9H078 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLPBQ9H078 AC079834.2-201ENST00000609776 1949 ntBASIC21.55■■□□□ 1.04
CLPBQ9H078 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLPBQ9H078 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.55■■□□□ 1.04
CLPBQ9H078 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CLPBQ9H078 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLPBQ9H078 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.55■■□□□ 1.04
CLPBQ9H078 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.55■■□□□ 1.04
CLPBQ9H078 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
CLPBQ9H078 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.55■■□□□ 1.04
CLPBQ9H078 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLPBQ9H078 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.55■■□□□ 1.04
CLPBQ9H078 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLPBQ9H078 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLPBQ9H078 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.55■■□□□ 1.04
CLPBQ9H078 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.55■■□□□ 1.04
CLPBQ9H078 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.54■■□□□ 1.04
CLPBQ9H078 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLPBQ9H078 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLPBQ9H078 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.54■■□□□ 1.04
CLPBQ9H078 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.54■■□□□ 1.04
CLPBQ9H078 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLPBQ9H078 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLPBQ9H078 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLPBQ9H078 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.54■■□□□ 1.04
CLPBQ9H078 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.54■■□□□ 1.04
CLPBQ9H078 AC010141.3-201ENST00000456659 717 ntBASIC21.54■■□□□ 1.04
CLPBQ9H078 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.54■■□□□ 1.04
CLPBQ9H078 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLPBQ9H078 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLPBQ9H078 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLPBQ9H078 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLPBQ9H078 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLPBQ9H078 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.54■■□□□ 1.04
CLPBQ9H078 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLPBQ9H078 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLPBQ9H078 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLPBQ9H078 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CLPBQ9H078 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLPBQ9H078 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLPBQ9H078 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLPBQ9H078 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.53■■□□□ 1.04
CLPBQ9H078 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLPBQ9H078 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLPBQ9H078 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.53■■□□□ 1.04
CLPBQ9H078 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLPBQ9H078 AC092437.1-201ENST00000624794 1048 ntBASIC21.53■■□□□ 1.04
CLPBQ9H078 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLPBQ9H078 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.53■■□□□ 1.04
CLPBQ9H078 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CLPBQ9H078 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLPBQ9H078 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLPBQ9H078 AC092053.2-201ENST00000640557 1818 ntBASIC21.52■■□□□ 1.04
CLPBQ9H078 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CLPBQ9H078 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLPBQ9H078 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CLPBQ9H078 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CLPBQ9H078 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CLPBQ9H078 AC079089.2-201ENST00000531211 1277 ntBASIC21.52■■□□□ 1.04
CLPBQ9H078 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CLPBQ9H078 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLPBQ9H078 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
CLPBQ9H078 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLPBQ9H078 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLPBQ9H078 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
CLPBQ9H078 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.51■■□□□ 1.03
CLPBQ9H078 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLPBQ9H078 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLPBQ9H078 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLPBQ9H078 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLPBQ9H078 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLPBQ9H078 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.51■■□□□ 1.03
CLPBQ9H078 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.51■■□□□ 1.03
CLPBQ9H078 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLPBQ9H078 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.51■■□□□ 1.03
CLPBQ9H078 NTF6G-201ENST00000591094 616 ntBASIC21.51■■□□□ 1.03
CLPBQ9H078 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLPBQ9H078 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.51■■□□□ 1.03
CLPBQ9H078 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLPBQ9H078 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.5■■□□□ 1.03
CLPBQ9H078 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.5■■□□□ 1.03
CLPBQ9H078 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLPBQ9H078 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.5■■□□□ 1.03
CLPBQ9H078 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLPBQ9H078 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.5■■□□□ 1.03
CLPBQ9H078 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLPBQ9H078 CLDN5-201ENST00000403084 2357 ntBASIC21.5■■□□□ 1.03
CLPBQ9H078 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.5■■□□□ 1.03
CLPBQ9H078 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms