Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.1■□□□□ 0.49
HDHD3Q9BSH5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HDHD3Q9BSH5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.1■□□□□ 0.49
HDHD3Q9BSH5 AC241377.3-202ENST00000626088 1088 ntBASIC18.1■□□□□ 0.49
HDHD3Q9BSH5 AC241585.3-202ENST00000628937 1088 ntBASIC18.1■□□□□ 0.49
HDHD3Q9BSH5 AC245100.8-202ENST00000629247 1058 ntBASIC18.1■□□□□ 0.49
HDHD3Q9BSH5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HDHD3Q9BSH5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
HDHD3Q9BSH5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDHD3Q9BSH5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HDHD3Q9BSH5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HDHD3Q9BSH5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDHD3Q9BSH5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.09■□□□□ 0.49
HDHD3Q9BSH5 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.09■□□□□ 0.49
HDHD3Q9BSH5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDHD3Q9BSH5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDHD3Q9BSH5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.09■□□□□ 0.49
HDHD3Q9BSH5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.09■□□□□ 0.49
HDHD3Q9BSH5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.09■□□□□ 0.49
HDHD3Q9BSH5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDHD3Q9BSH5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.09■□□□□ 0.49
HDHD3Q9BSH5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HDHD3Q9BSH5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDHD3Q9BSH5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.09■□□□□ 0.49
HDHD3Q9BSH5 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
HDHD3Q9BSH5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
HDHD3Q9BSH5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HDHD3Q9BSH5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
HDHD3Q9BSH5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.08■□□□□ 0.49
HDHD3Q9BSH5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
HDHD3Q9BSH5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
HDHD3Q9BSH5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HDHD3Q9BSH5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HDHD3Q9BSH5 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
HDHD3Q9BSH5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.08■□□□□ 0.48
HDHD3Q9BSH5 AC099791.2-201ENST00000605725 427 ntBASIC18.08■□□□□ 0.48
HDHD3Q9BSH5 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.08■□□□□ 0.48
HDHD3Q9BSH5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HDHD3Q9BSH5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.08■□□□□ 0.48
HDHD3Q9BSH5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HDHD3Q9BSH5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
HDHD3Q9BSH5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HDHD3Q9BSH5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HDHD3Q9BSH5 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HDHD3Q9BSH5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HDHD3Q9BSH5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
HDHD3Q9BSH5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.07■□□□□ 0.48
HDHD3Q9BSH5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HDHD3Q9BSH5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.07■□□□□ 0.48
HDHD3Q9BSH5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HDHD3Q9BSH5 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HDHD3Q9BSH5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HDHD3Q9BSH5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HDHD3Q9BSH5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HDHD3Q9BSH5 SLC25A24-204ENST00000569674 2357 ntBASIC18.07■□□□□ 0.48
HDHD3Q9BSH5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HDHD3Q9BSH5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HDHD3Q9BSH5 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.07■□□□□ 0.48
HDHD3Q9BSH5 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
HDHD3Q9BSH5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HDHD3Q9BSH5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.07■□□□□ 0.48
HDHD3Q9BSH5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
HDHD3Q9BSH5 OR7E47P-201ENST00000546390 1422 ntBASIC18.06■□□□□ 0.48
HDHD3Q9BSH5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.06■□□□□ 0.48
HDHD3Q9BSH5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDHD3Q9BSH5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HDHD3Q9BSH5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.06■□□□□ 0.48
HDHD3Q9BSH5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HDHD3Q9BSH5 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDHD3Q9BSH5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HDHD3Q9BSH5 KRT16P3-201ENST00000439127 1283 ntBASIC18.06■□□□□ 0.48
HDHD3Q9BSH5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.06■□□□□ 0.48
HDHD3Q9BSH5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.06■□□□□ 0.48
HDHD3Q9BSH5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
HDHD3Q9BSH5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.06■□□□□ 0.48
HDHD3Q9BSH5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDHD3Q9BSH5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDHD3Q9BSH5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDHD3Q9BSH5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDHD3Q9BSH5 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HDHD3Q9BSH5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDHD3Q9BSH5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.06■□□□□ 0.48
HDHD3Q9BSH5 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDHD3Q9BSH5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDHD3Q9BSH5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.05■□□□□ 0.48
HDHD3Q9BSH5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDHD3Q9BSH5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HDHD3Q9BSH5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDHD3Q9BSH5 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.05■□□□□ 0.48
HDHD3Q9BSH5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.05■□□□□ 0.48
HDHD3Q9BSH5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDHD3Q9BSH5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.05■□□□□ 0.48
HDHD3Q9BSH5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDHD3Q9BSH5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDHD3Q9BSH5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms