Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPENQ96T58 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPENQ96T58 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.54■□□□□ 0.72
SPENQ96T58 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.54■□□□□ 0.72
SPENQ96T58 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPENQ96T58 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.54■□□□□ 0.72
SPENQ96T58 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPENQ96T58 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.54■□□□□ 0.72
SPENQ96T58 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPENQ96T58 KRT18P29-201ENST00000397031 1267 ntBASIC19.54■□□□□ 0.72
SPENQ96T58 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPENQ96T58 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.53■□□□□ 0.72
SPENQ96T58 FAM201B-201ENST00000458407 597 ntBASIC19.53■□□□□ 0.72
SPENQ96T58 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.53■□□□□ 0.72
SPENQ96T58 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPENQ96T58 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SPENQ96T58 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.53■□□□□ 0.72
SPENQ96T58 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SPENQ96T58 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPENQ96T58 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPENQ96T58 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPENQ96T58 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SPENQ96T58 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.53■□□□□ 0.72
SPENQ96T58 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SPENQ96T58 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.53■□□□□ 0.72
SPENQ96T58 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SPENQ96T58 AC009237.3-201ENST00000393279 1427 ntBASIC19.53■□□□□ 0.72
SPENQ96T58 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPENQ96T58 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SPENQ96T58 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SPENQ96T58 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SPENQ96T58 LINC01960-201ENST00000563759 1884 ntBASIC19.52■□□□□ 0.72
SPENQ96T58 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.52■□□□□ 0.72
SPENQ96T58 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.52■□□□□ 0.72
SPENQ96T58 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SPENQ96T58 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SPENQ96T58 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SPENQ96T58 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
SPENQ96T58 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SPENQ96T58 AC010141.3-201ENST00000456659 717 ntBASIC19.52■□□□□ 0.71
SPENQ96T58 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SPENQ96T58 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPENQ96T58 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPENQ96T58 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPENQ96T58 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPENQ96T58 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SPENQ96T58 AC068338.2-201ENST00000563278 1430 ntBASIC19.51■□□□□ 0.71
SPENQ96T58 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPENQ96T58 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.51■□□□□ 0.71
SPENQ96T58 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SPENQ96T58 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPENQ96T58 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.51■□□□□ 0.71
SPENQ96T58 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SPENQ96T58 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SPENQ96T58 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SPENQ96T58 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPENQ96T58 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.5■□□□□ 0.71
SPENQ96T58 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.5■□□□□ 0.71
SPENQ96T58 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.5■□□□□ 0.71
SPENQ96T58 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
SPENQ96T58 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.5■□□□□ 0.71
SPENQ96T58 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPENQ96T58 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.5■□□□□ 0.71
SPENQ96T58 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.5■□□□□ 0.71
SPENQ96T58 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.5■□□□□ 0.71
SPENQ96T58 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SPENQ96T58 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPENQ96T58 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPENQ96T58 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPENQ96T58 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPENQ96T58 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SPENQ96T58 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPENQ96T58 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPENQ96T58 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPENQ96T58 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.49■□□□□ 0.71
SPENQ96T58 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.49■□□□□ 0.71
SPENQ96T58 AC133041.1-202ENST00000642053 222 ntBASIC19.49■□□□□ 0.71
SPENQ96T58 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SPENQ96T58 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.49■□□□□ 0.71
SPENQ96T58 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SPENQ96T58 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.49■□□□□ 0.71
SPENQ96T58 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPENQ96T58 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPENQ96T58 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.49■□□□□ 0.71
SPENQ96T58 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SPENQ96T58 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SPENQ96T58 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.49■□□□□ 0.71
SPENQ96T58 RNA5SP413-201ENST00000516373 109 ntBASIC19.49■□□□□ 0.71
SPENQ96T58 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.49■□□□□ 0.71
SPENQ96T58 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SPENQ96T58 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.48■□□□□ 0.71
SPENQ96T58 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.48■□□□□ 0.71
SPENQ96T58 AC128676.1-201ENST00000454392 318 ntBASIC19.48■□□□□ 0.71
SPENQ96T58 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.48■□□□□ 0.71
SPENQ96T58 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.48■□□□□ 0.71
SPENQ96T58 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.48■□□□□ 0.71
SPENQ96T58 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPENQ96T58 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPENQ96T58 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPENQ96T58 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms