Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.01■■□□□ 1.27
ZNF560Q96MR9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.01■■□□□ 1.27
ZNF560Q96MR9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.01■■□□□ 1.27
ZNF560Q96MR9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.01■■□□□ 1.27
ZNF560Q96MR9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.01■■□□□ 1.27
ZNF560Q96MR9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
ZNF560Q96MR9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.01■■□□□ 1.27
ZNF560Q96MR9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
ZNF560Q96MR9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ZNF560Q96MR9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ZNF560Q96MR9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.01■■□□□ 1.27
ZNF560Q96MR9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.01■■□□□ 1.27
ZNF560Q96MR9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ZNF560Q96MR9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23■■□□□ 1.27
ZNF560Q96MR9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
ZNF560Q96MR9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23■■□□□ 1.27
ZNF560Q96MR9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
ZNF560Q96MR9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23■■□□□ 1.27
ZNF560Q96MR9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23■■□□□ 1.27
ZNF560Q96MR9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
ZNF560Q96MR9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
ZNF560Q96MR9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
ZNF560Q96MR9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23■■□□□ 1.27
ZNF560Q96MR9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23■■□□□ 1.27
ZNF560Q96MR9 AC092666.2-201ENST00000613287 246 ntBASIC23■■□□□ 1.27
ZNF560Q96MR9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23■■□□□ 1.27
ZNF560Q96MR9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ZNF560Q96MR9 AC004854.2-201ENST00000608450 1441 ntBASIC22.99■■□□□ 1.27
ZNF560Q96MR9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.99■■□□□ 1.27
ZNF560Q96MR9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
ZNF560Q96MR9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ZNF560Q96MR9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
ZNF560Q96MR9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.99■■□□□ 1.27
ZNF560Q96MR9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.99■■□□□ 1.27
ZNF560Q96MR9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.99■■□□□ 1.27
ZNF560Q96MR9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ZNF560Q96MR9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.99■■□□□ 1.27
ZNF560Q96MR9 AP004607.4-201ENST00000530158 1459 ntBASIC22.98■■□□□ 1.27
ZNF560Q96MR9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.98■■□□□ 1.27
ZNF560Q96MR9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZNF560Q96MR9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.98■■□□□ 1.27
ZNF560Q96MR9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.98■■□□□ 1.27
ZNF560Q96MR9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.98■■□□□ 1.27
ZNF560Q96MR9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZNF560Q96MR9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZNF560Q96MR9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZNF560Q96MR9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ZNF560Q96MR9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
ZNF560Q96MR9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZNF560Q96MR9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.98■■□□□ 1.27
ZNF560Q96MR9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
ZNF560Q96MR9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
ZNF560Q96MR9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ZNF560Q96MR9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZNF560Q96MR9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.97■■□□□ 1.27
ZNF560Q96MR9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ZNF560Q96MR9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.97■■□□□ 1.27
ZNF560Q96MR9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ZNF560Q96MR9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
ZNF560Q96MR9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZNF560Q96MR9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ZNF560Q96MR9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ZNF560Q96MR9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZNF560Q96MR9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ZNF560Q96MR9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
ZNF560Q96MR9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ZNF560Q96MR9 AC092053.2-201ENST00000640557 1818 ntBASIC22.96■■□□□ 1.27
ZNF560Q96MR9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.96■■□□□ 1.27
ZNF560Q96MR9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
ZNF560Q96MR9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ZNF560Q96MR9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.96■■□□□ 1.27
ZNF560Q96MR9 KRT19P1-201ENST00000405746 1186 ntBASIC22.96■■□□□ 1.27
ZNF560Q96MR9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.96■■□□□ 1.27
ZNF560Q96MR9 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.96■■□□□ 1.27
ZNF560Q96MR9 KRT18P61-201ENST00000585825 1298 ntBASIC22.96■■□□□ 1.27
ZNF560Q96MR9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.96■■□□□ 1.27
ZNF560Q96MR9 AC022517.1-201ENST00000592429 346 ntBASIC22.96■■□□□ 1.27
ZNF560Q96MR9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ZNF560Q96MR9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.96■■□□□ 1.27
ZNF560Q96MR9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.96■■□□□ 1.27
ZNF560Q96MR9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
ZNF560Q96MR9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.96■■□□□ 1.27
ZNF560Q96MR9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.96■■□□□ 1.27
ZNF560Q96MR9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.27
ZNF560Q96MR9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZNF560Q96MR9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
ZNF560Q96MR9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZNF560Q96MR9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
ZNF560Q96MR9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZNF560Q96MR9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
ZNF560Q96MR9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.95■■□□□ 1.26
ZNF560Q96MR9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZNF560Q96MR9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.95■■□□□ 1.26
ZNF560Q96MR9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.95■■□□□ 1.26
ZNF560Q96MR9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.95■■□□□ 1.26
ZNF560Q96MR9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.95■■□□□ 1.26
ZNF560Q96MR9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZNF560Q96MR9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
ZNF560Q96MR9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.94■■□□□ 1.26
ZNF560Q96MR9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms