Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PTP4A1Q93096 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTP4A1Q93096 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.27■□□□□ 0.67
PTP4A1Q93096 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PTP4A1Q93096 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.27■□□□□ 0.67
PTP4A1Q93096 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTP4A1Q93096 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTP4A1Q93096 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PTP4A1Q93096 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTP4A1Q93096 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTP4A1Q93096 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTP4A1Q93096 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTP4A1Q93096 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PTP4A1Q93096 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.26■□□□□ 0.67
PTP4A1Q93096 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTP4A1Q93096 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTP4A1Q93096 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTP4A1Q93096 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
PTP4A1Q93096 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PTP4A1Q93096 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTP4A1Q93096 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PTP4A1Q93096 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTP4A1Q93096 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTP4A1Q93096 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTP4A1Q93096 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTP4A1Q93096 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.25■□□□□ 0.67
PTP4A1Q93096 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTP4A1Q93096 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTP4A1Q93096 AC099791.2-201ENST00000605725 427 ntBASIC19.25■□□□□ 0.67
PTP4A1Q93096 AC131212.1-201ENST00000613771 668 ntBASIC19.25■□□□□ 0.67
PTP4A1Q93096 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTP4A1Q93096 OR7E47P-201ENST00000546390 1422 ntBASIC19.25■□□□□ 0.67
PTP4A1Q93096 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.25■□□□□ 0.67
PTP4A1Q93096 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.24■□□□□ 0.67
PTP4A1Q93096 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTP4A1Q93096 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PTP4A1Q93096 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTP4A1Q93096 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTP4A1Q93096 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTP4A1Q93096 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTP4A1Q93096 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.24■□□□□ 0.67
PTP4A1Q93096 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.24■□□□□ 0.67
PTP4A1Q93096 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.24■□□□□ 0.67
PTP4A1Q93096 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.24■□□□□ 0.67
PTP4A1Q93096 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.24■□□□□ 0.67
PTP4A1Q93096 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTP4A1Q93096 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTP4A1Q93096 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.24■□□□□ 0.67
PTP4A1Q93096 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.24■□□□□ 0.67
PTP4A1Q93096 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTP4A1Q93096 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTP4A1Q93096 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.23■□□□□ 0.67
PTP4A1Q93096 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.23■□□□□ 0.67
PTP4A1Q93096 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTP4A1Q93096 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTP4A1Q93096 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.23■□□□□ 0.67
PTP4A1Q93096 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.23■□□□□ 0.67
PTP4A1Q93096 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTP4A1Q93096 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.23■□□□□ 0.67
PTP4A1Q93096 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PTP4A1Q93096 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.23■□□□□ 0.67
PTP4A1Q93096 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PTP4A1Q93096 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
PTP4A1Q93096 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.23■□□□□ 0.67
PTP4A1Q93096 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTP4A1Q93096 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
PTP4A1Q93096 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PTP4A1Q93096 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.23■□□□□ 0.67
PTP4A1Q93096 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PTP4A1Q93096 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTP4A1Q93096 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.22■□□□□ 0.67
PTP4A1Q93096 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.22■□□□□ 0.67
PTP4A1Q93096 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTP4A1Q93096 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.22■□□□□ 0.67
PTP4A1Q93096 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTP4A1Q93096 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.22■□□□□ 0.67
PTP4A1Q93096 MIR3181-201ENST00000578512 73 ntBASIC19.22■□□□□ 0.67
PTP4A1Q93096 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.22■□□□□ 0.67
PTP4A1Q93096 AL512631.2-201ENST00000604634 923 ntBASIC19.22■□□□□ 0.67
PTP4A1Q93096 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTP4A1Q93096 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PTP4A1Q93096 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.22■□□□□ 0.67
PTP4A1Q93096 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PTP4A1Q93096 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTP4A1Q93096 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTP4A1Q93096 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTP4A1Q93096 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PTP4A1Q93096 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.21■□□□□ 0.67
PTP4A1Q93096 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.21■□□□□ 0.67
PTP4A1Q93096 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.21■□□□□ 0.67
PTP4A1Q93096 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.21■□□□□ 0.67
PTP4A1Q93096 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.21■□□□□ 0.67
PTP4A1Q93096 AC068587.7-201ENST00000641602 218 ntBASIC19.21■□□□□ 0.67
PTP4A1Q93096 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PTP4A1Q93096 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTP4A1Q93096 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.21■□□□□ 0.67
PTP4A1Q93096 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PTP4A1Q93096 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTP4A1Q93096 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTP4A1Q93096 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms