Protein–RNA interactions for Protein: Q8N587

ZNF561, Zinc finger protein 561, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561Q8N587 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF561Q8N587 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.21■□□□□ 0.51
ZNF561Q8N587 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
ZNF561Q8N587 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ZNF561Q8N587 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
ZNF561Q8N587 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ZNF561Q8N587 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF561Q8N587 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF561Q8N587 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF561Q8N587 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ZNF561Q8N587 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ZNF561Q8N587 EDA-201ENST00000338901 1233 ntBASIC18.2■□□□□ 0.5
ZNF561Q8N587 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.2■□□□□ 0.5
ZNF561Q8N587 AL139246.5-201ENST00000606645 996 ntBASIC18.2■□□□□ 0.5
ZNF561Q8N587 AC233992.3-201ENST00000607491 485 ntBASIC18.2■□□□□ 0.5
ZNF561Q8N587 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ZNF561Q8N587 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF561Q8N587 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF561Q8N587 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF561Q8N587 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.2■□□□□ 0.5
ZNF561Q8N587 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF561Q8N587 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF561Q8N587 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.2■□□□□ 0.5
ZNF561Q8N587 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.2■□□□□ 0.5
ZNF561Q8N587 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF561Q8N587 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
ZNF561Q8N587 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF561Q8N587 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ZNF561Q8N587 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF561Q8N587 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF561Q8N587 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF561Q8N587 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
ZNF561Q8N587 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF561Q8N587 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF561Q8N587 AC010141.3-201ENST00000456659 717 ntBASIC18.19■□□□□ 0.5
ZNF561Q8N587 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.19■□□□□ 0.5
ZNF561Q8N587 AC133561.4-201ENST00000566112 224 ntBASIC18.19■□□□□ 0.5
ZNF561Q8N587 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.19■□□□□ 0.5
ZNF561Q8N587 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
ZNF561Q8N587 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ZNF561Q8N587 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ZNF561Q8N587 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ZNF561Q8N587 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF561Q8N587 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF561Q8N587 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ZNF561Q8N587 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.18■□□□□ 0.5
ZNF561Q8N587 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF561Q8N587 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.18■□□□□ 0.5
ZNF561Q8N587 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF561Q8N587 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.18■□□□□ 0.5
ZNF561Q8N587 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF561Q8N587 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.18■□□□□ 0.5
ZNF561Q8N587 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF561Q8N587 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF561Q8N587 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF561Q8N587 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ZNF561Q8N587 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF561Q8N587 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF561Q8N587 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF561Q8N587 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF561Q8N587 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF561Q8N587 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF561Q8N587 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF561Q8N587 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNF561Q8N587 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF561Q8N587 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
ZNF561Q8N587 AC027682.1-201ENST00000562846 899 ntBASIC18.17■□□□□ 0.5
ZNF561Q8N587 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ZNF561Q8N587 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.17■□□□□ 0.5
ZNF561Q8N587 AL355001.2-201ENST00000620617 1191 ntBASIC18.17■□□□□ 0.5
ZNF561Q8N587 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNF561Q8N587 AC073130.3-201ENST00000624389 2278 ntBASIC18.17■□□□□ 0.5
ZNF561Q8N587 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF561Q8N587 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ZNF561Q8N587 ECEL1P1-201ENST00000373592 1742 ntBASIC18.17■□□□□ 0.5
ZNF561Q8N587 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF561Q8N587 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ZNF561Q8N587 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF561Q8N587 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF561Q8N587 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ZNF561Q8N587 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF561Q8N587 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF561Q8N587 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF561Q8N587 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
ZNF561Q8N587 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ZNF561Q8N587 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.16■□□□□ 0.5
ZNF561Q8N587 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF561Q8N587 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ZNF561Q8N587 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.16■□□□□ 0.5
ZNF561Q8N587 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF561Q8N587 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF561Q8N587 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF561Q8N587 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF561Q8N587 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF561Q8N587 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ZNF561Q8N587 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.15■□□□□ 0.5
ZNF561Q8N587 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
ZNF561Q8N587 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF561Q8N587 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
ZNF561Q8N587 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms