Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
ARHGEF28Q8N1W1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
ARHGEF28Q8N1W1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC30.08■■■□□ 2.41
ARHGEF28Q8N1W1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC30.08■■■□□ 2.41
ARHGEF28Q8N1W1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
ARHGEF28Q8N1W1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
ARHGEF28Q8N1W1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC30.07■■■□□ 2.4
ARHGEF28Q8N1W1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC30.07■■■□□ 2.4
ARHGEF28Q8N1W1 AC010536.3-201ENST00000620306 533 ntBASIC30.07■■■□□ 2.4
ARHGEF28Q8N1W1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
ARHGEF28Q8N1W1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
ARHGEF28Q8N1W1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC30.06■■■□□ 2.4
ARHGEF28Q8N1W1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
ARHGEF28Q8N1W1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
ARHGEF28Q8N1W1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC30.05■■■□□ 2.4
ARHGEF28Q8N1W1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
ARHGEF28Q8N1W1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
ARHGEF28Q8N1W1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC30.05■■■□□ 2.4
ARHGEF28Q8N1W1 MDK-213ENST00000617138 635 ntTSL 2 BASIC30.05■■■□□ 2.4
ARHGEF28Q8N1W1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
ARHGEF28Q8N1W1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
ARHGEF28Q8N1W1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC30.05■■■□□ 2.4
ARHGEF28Q8N1W1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
ARHGEF28Q8N1W1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
ARHGEF28Q8N1W1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
ARHGEF28Q8N1W1 APTR-203ENST00000430801 583 ntTSL 5 BASIC30.05■■■□□ 2.4
ARHGEF28Q8N1W1 AC005181.1-201ENST00000604782 1256 ntBASIC30.05■■■□□ 2.4
ARHGEF28Q8N1W1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
ARHGEF28Q8N1W1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
ARHGEF28Q8N1W1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
ARHGEF28Q8N1W1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
ARHGEF28Q8N1W1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
ARHGEF28Q8N1W1 GPX1P1-201ENST00000388829 606 ntBASIC30.04■■■□□ 2.4
ARHGEF28Q8N1W1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC30.04■■■□□ 2.4
ARHGEF28Q8N1W1 APTR-205ENST00000447009 902 ntTSL 2 BASIC30.04■■■□□ 2.4
ARHGEF28Q8N1W1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
ARHGEF28Q8N1W1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
ARHGEF28Q8N1W1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC30.04■■■□□ 2.4
ARHGEF28Q8N1W1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
ARHGEF28Q8N1W1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
ARHGEF28Q8N1W1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC30.03■■■□□ 2.4
ARHGEF28Q8N1W1 AL121832.2-201ENST00000610979 668 ntBASIC30.03■■■□□ 2.4
ARHGEF28Q8N1W1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC30.03■■■□□ 2.4
ARHGEF28Q8N1W1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
ARHGEF28Q8N1W1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC30.03■■■□□ 2.4
ARHGEF28Q8N1W1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC30.03■■■□□ 2.4
ARHGEF28Q8N1W1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC30.02■■■□□ 2.4
ARHGEF28Q8N1W1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC30.02■■■□□ 2.4
ARHGEF28Q8N1W1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC30.02■■■□□ 2.4
ARHGEF28Q8N1W1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
ARHGEF28Q8N1W1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
ARHGEF28Q8N1W1 AC007322.1-201ENST00000426983 750 ntBASIC30.02■■■□□ 2.4
ARHGEF28Q8N1W1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC30.02■■■□□ 2.4
ARHGEF28Q8N1W1 TSPY6P-201ENST00000448518 926 ntBASIC30.02■■■□□ 2.4
ARHGEF28Q8N1W1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
ARHGEF28Q8N1W1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC30.02■■■□□ 2.4
ARHGEF28Q8N1W1 AC013268.1-206ENST00000638368 961 ntBASIC30.02■■■□□ 2.4
ARHGEF28Q8N1W1 AC112229.1-201ENST00000639295 961 ntBASIC30.02■■■□□ 2.4
ARHGEF28Q8N1W1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
ARHGEF28Q8N1W1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
ARHGEF28Q8N1W1 AC139530.1-201ENST00000575312 1977 ntBASIC30.01■■■□□ 2.4
ARHGEF28Q8N1W1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
ARHGEF28Q8N1W1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
ARHGEF28Q8N1W1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
ARHGEF28Q8N1W1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC30.01■■■□□ 2.39
ARHGEF28Q8N1W1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC30.01■■■□□ 2.39
ARHGEF28Q8N1W1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC30.01■■■□□ 2.39
ARHGEF28Q8N1W1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
ARHGEF28Q8N1W1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
ARHGEF28Q8N1W1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
ARHGEF28Q8N1W1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
ARHGEF28Q8N1W1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
ARHGEF28Q8N1W1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC30■■■□□ 2.39
ARHGEF28Q8N1W1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
ARHGEF28Q8N1W1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
ARHGEF28Q8N1W1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
ARHGEF28Q8N1W1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ARHGEF28Q8N1W1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC29.99■■■□□ 2.39
ARHGEF28Q8N1W1 AC007322.4-201ENST00000509611 723 ntBASIC29.99■■■□□ 2.39
ARHGEF28Q8N1W1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
ARHGEF28Q8N1W1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC29.99■■■□□ 2.39
ARHGEF28Q8N1W1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
ARHGEF28Q8N1W1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ARHGEF28Q8N1W1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC29.99■■■□□ 2.39
ARHGEF28Q8N1W1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
ARHGEF28Q8N1W1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ARHGEF28Q8N1W1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC29.99■■■□□ 2.39
ARHGEF28Q8N1W1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ARHGEF28Q8N1W1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC29.99■■■□□ 2.39
ARHGEF28Q8N1W1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ARHGEF28Q8N1W1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC29.99■■■□□ 2.39
ARHGEF28Q8N1W1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC29.99■■■□□ 2.39
ARHGEF28Q8N1W1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC29.99■■■□□ 2.39
ARHGEF28Q8N1W1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ARHGEF28Q8N1W1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC29.98■■■□□ 2.39
ARHGEF28Q8N1W1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
ARHGEF28Q8N1W1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
ARHGEF28Q8N1W1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
ARHGEF28Q8N1W1 AL138781.1-201ENST00000566567 1274 ntBASIC29.98■■■□□ 2.39
ARHGEF28Q8N1W1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms