Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
VPS52Q8N1B4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
VPS52Q8N1B4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.23■■□□□ 1.31
VPS52Q8N1B4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.23■■□□□ 1.31
VPS52Q8N1B4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
VPS52Q8N1B4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
VPS52Q8N1B4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.23■■□□□ 1.31
VPS52Q8N1B4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.23■■□□□ 1.31
VPS52Q8N1B4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.23■■□□□ 1.31
VPS52Q8N1B4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
VPS52Q8N1B4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
VPS52Q8N1B4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
VPS52Q8N1B4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
VPS52Q8N1B4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.22■■□□□ 1.31
VPS52Q8N1B4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.22■■□□□ 1.31
VPS52Q8N1B4 AC092068.2-201ENST00000590491 1708 ntBASIC23.22■■□□□ 1.31
VPS52Q8N1B4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.22■■□□□ 1.31
VPS52Q8N1B4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
VPS52Q8N1B4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.22■■□□□ 1.31
VPS52Q8N1B4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.22■■□□□ 1.31
VPS52Q8N1B4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.22■■□□□ 1.31
VPS52Q8N1B4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
VPS52Q8N1B4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
VPS52Q8N1B4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
VPS52Q8N1B4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS52Q8N1B4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
VPS52Q8N1B4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS52Q8N1B4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
VPS52Q8N1B4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
VPS52Q8N1B4 DUSP8P3-201ENST00000399571 1760 ntBASIC23.21■■□□□ 1.31
VPS52Q8N1B4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
VPS52Q8N1B4 C9orf163-202ENST00000624034 2573 ntBASIC23.2■■□□□ 1.3
VPS52Q8N1B4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.2■■□□□ 1.3
VPS52Q8N1B4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
VPS52Q8N1B4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
VPS52Q8N1B4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
VPS52Q8N1B4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
VPS52Q8N1B4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
VPS52Q8N1B4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
VPS52Q8N1B4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.2■■□□□ 1.3
VPS52Q8N1B4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.2■■□□□ 1.3
VPS52Q8N1B4 AL109923.1-201ENST00000618799 583 ntBASIC23.2■■□□□ 1.3
VPS52Q8N1B4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
VPS52Q8N1B4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
VPS52Q8N1B4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
VPS52Q8N1B4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
VPS52Q8N1B4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.19■■□□□ 1.3
VPS52Q8N1B4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
VPS52Q8N1B4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
VPS52Q8N1B4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
VPS52Q8N1B4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
VPS52Q8N1B4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.19■■□□□ 1.3
VPS52Q8N1B4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
VPS52Q8N1B4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VPS52Q8N1B4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VPS52Q8N1B4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
VPS52Q8N1B4 NCF1B-203ENST00000435988 1254 ntBASIC23.18■■□□□ 1.3
VPS52Q8N1B4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VPS52Q8N1B4 AC005224.4-201ENST00000583262 1652 ntBASIC23.18■■□□□ 1.3
VPS52Q8N1B4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
VPS52Q8N1B4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
VPS52Q8N1B4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS52Q8N1B4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
VPS52Q8N1B4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
VPS52Q8N1B4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS52Q8N1B4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS52Q8N1B4 MIR663A-201ENST00000385250 93 ntBASIC23.17■■□□□ 1.3
VPS52Q8N1B4 AL355802.2-201ENST00000402069 882 ntBASIC23.17■■□□□ 1.3
VPS52Q8N1B4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.17■■□□□ 1.3
VPS52Q8N1B4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS52Q8N1B4 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.17■■□□□ 1.3
VPS52Q8N1B4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS52Q8N1B4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.17■■□□□ 1.3
VPS52Q8N1B4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.17■■□□□ 1.3
VPS52Q8N1B4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.17■■□□□ 1.3
VPS52Q8N1B4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS52Q8N1B4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.16■■□□□ 1.3
VPS52Q8N1B4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS52Q8N1B4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS52Q8N1B4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.16■■□□□ 1.3
VPS52Q8N1B4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.16■■□□□ 1.3
VPS52Q8N1B4 AC104187.1-201ENST00000607510 612 ntBASIC23.16■■□□□ 1.3
VPS52Q8N1B4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS52Q8N1B4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS52Q8N1B4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS52Q8N1B4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
VPS52Q8N1B4 AC009237.3-201ENST00000393279 1427 ntBASIC23.16■■□□□ 1.3
VPS52Q8N1B4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS52Q8N1B4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS52Q8N1B4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS52Q8N1B4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
VPS52Q8N1B4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
VPS52Q8N1B4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
VPS52Q8N1B4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS52Q8N1B4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS52Q8N1B4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS52Q8N1B4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.15■■□□□ 1.3
VPS52Q8N1B4 CLDN5-201ENST00000403084 2357 ntBASIC23.15■■□□□ 1.3
VPS52Q8N1B4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS52Q8N1B4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms