Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.07■□□□□ 0.96
VRK3Q8IV63 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
VRK3Q8IV63 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
VRK3Q8IV63 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VRK3Q8IV63 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.06■□□□□ 0.96
VRK3Q8IV63 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.06■□□□□ 0.96
VRK3Q8IV63 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.06■□□□□ 0.96
VRK3Q8IV63 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VRK3Q8IV63 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VRK3Q8IV63 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VRK3Q8IV63 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.05■□□□□ 0.96
VRK3Q8IV63 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VRK3Q8IV63 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
VRK3Q8IV63 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
VRK3Q8IV63 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.05■□□□□ 0.96
VRK3Q8IV63 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VRK3Q8IV63 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VRK3Q8IV63 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
VRK3Q8IV63 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VRK3Q8IV63 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VRK3Q8IV63 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VRK3Q8IV63 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VRK3Q8IV63 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.04■□□□□ 0.96
VRK3Q8IV63 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.04■□□□□ 0.96
VRK3Q8IV63 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.04■□□□□ 0.96
VRK3Q8IV63 AL354811.1-201ENST00000610286 706 ntBASIC21.04■□□□□ 0.96
VRK3Q8IV63 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.04■□□□□ 0.96
VRK3Q8IV63 AL358852.1-201ENST00000623174 1268 ntBASIC21.04■□□□□ 0.96
VRK3Q8IV63 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.04■□□□□ 0.96
VRK3Q8IV63 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
VRK3Q8IV63 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VRK3Q8IV63 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
VRK3Q8IV63 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VRK3Q8IV63 BX005040.4-201ENST00000637145 1518 ntBASIC21.04■□□□□ 0.96
VRK3Q8IV63 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
VRK3Q8IV63 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
VRK3Q8IV63 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VRK3Q8IV63 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VRK3Q8IV63 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VRK3Q8IV63 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
VRK3Q8IV63 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.03■□□□□ 0.96
VRK3Q8IV63 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.03■□□□□ 0.96
VRK3Q8IV63 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.03■□□□□ 0.96
VRK3Q8IV63 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
VRK3Q8IV63 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VRK3Q8IV63 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.03■□□□□ 0.96
VRK3Q8IV63 AC019069.1-201ENST00000610008 1333 ntBASIC21.03■□□□□ 0.96
VRK3Q8IV63 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VRK3Q8IV63 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.02■□□□□ 0.96
VRK3Q8IV63 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.02■□□□□ 0.96
VRK3Q8IV63 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VRK3Q8IV63 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.02■□□□□ 0.96
VRK3Q8IV63 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.02■□□□□ 0.96
VRK3Q8IV63 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VRK3Q8IV63 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
VRK3Q8IV63 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VRK3Q8IV63 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.02■□□□□ 0.96
VRK3Q8IV63 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VRK3Q8IV63 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VRK3Q8IV63 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VRK3Q8IV63 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.02■□□□□ 0.96
VRK3Q8IV63 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
VRK3Q8IV63 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.02■□□□□ 0.96
VRK3Q8IV63 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VRK3Q8IV63 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
VRK3Q8IV63 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.01■□□□□ 0.95
VRK3Q8IV63 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VRK3Q8IV63 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.01■□□□□ 0.95
VRK3Q8IV63 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VRK3Q8IV63 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VRK3Q8IV63 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VRK3Q8IV63 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.01■□□□□ 0.95
VRK3Q8IV63 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.01■□□□□ 0.95
VRK3Q8IV63 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.01■□□□□ 0.95
VRK3Q8IV63 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
VRK3Q8IV63 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.01■□□□□ 0.95
VRK3Q8IV63 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VRK3Q8IV63 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VRK3Q8IV63 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VRK3Q8IV63 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
VRK3Q8IV63 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21■□□□□ 0.95
VRK3Q8IV63 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VRK3Q8IV63 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VRK3Q8IV63 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VRK3Q8IV63 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21■□□□□ 0.95
VRK3Q8IV63 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21■□□□□ 0.95
VRK3Q8IV63 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VRK3Q8IV63 AL034346.1-201ENST00000568244 1277 ntBASIC21■□□□□ 0.95
VRK3Q8IV63 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21■□□□□ 0.95
VRK3Q8IV63 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
VRK3Q8IV63 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
VRK3Q8IV63 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21■□□□□ 0.95
VRK3Q8IV63 AC010542.4-201ENST00000563151 1910 ntBASIC21■□□□□ 0.95
VRK3Q8IV63 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.99■□□□□ 0.95
VRK3Q8IV63 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VRK3Q8IV63 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
VRK3Q8IV63 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
VRK3Q8IV63 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VRK3Q8IV63 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VRK3Q8IV63 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms