Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
TRIM50Q86XT4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
TRIM50Q86XT4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.99■■□□□ 1.43
TRIM50Q86XT4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.99■■□□□ 1.43
TRIM50Q86XT4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.99■■□□□ 1.43
TRIM50Q86XT4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.99■■□□□ 1.43
TRIM50Q86XT4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.99■■□□□ 1.43
TRIM50Q86XT4 UBE2DNL-204ENST00000602536 740 ntBASIC23.99■■□□□ 1.43
TRIM50Q86XT4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM50Q86XT4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM50Q86XT4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM50Q86XT4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM50Q86XT4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.98■■□□□ 1.43
TRIM50Q86XT4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.98■■□□□ 1.43
TRIM50Q86XT4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM50Q86XT4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
TRIM50Q86XT4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.98■■□□□ 1.43
TRIM50Q86XT4 KRT18P11-201ENST00000435214 1283 ntBASIC23.98■■□□□ 1.43
TRIM50Q86XT4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.98■■□□□ 1.43
TRIM50Q86XT4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.98■■□□□ 1.43
TRIM50Q86XT4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.98■■□□□ 1.43
TRIM50Q86XT4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM50Q86XT4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM50Q86XT4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM50Q86XT4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM50Q86XT4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM50Q86XT4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.98■■□□□ 1.43
TRIM50Q86XT4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM50Q86XT4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM50Q86XT4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM50Q86XT4 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.97■■□□□ 1.43
TRIM50Q86XT4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.97■■□□□ 1.43
TRIM50Q86XT4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.97■■□□□ 1.43
TRIM50Q86XT4 AP001160.3-201ENST00000601484 763 ntBASIC23.97■■□□□ 1.43
TRIM50Q86XT4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.97■■□□□ 1.43
TRIM50Q86XT4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
TRIM50Q86XT4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.97■■□□□ 1.43
TRIM50Q86XT4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.96■■□□□ 1.43
TRIM50Q86XT4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM50Q86XT4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM50Q86XT4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM50Q86XT4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM50Q86XT4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM50Q86XT4 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.96■■□□□ 1.43
TRIM50Q86XT4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.96■■□□□ 1.43
TRIM50Q86XT4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.96■■□□□ 1.43
TRIM50Q86XT4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM50Q86XT4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.96■■□□□ 1.43
TRIM50Q86XT4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
TRIM50Q86XT4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM50Q86XT4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.95■■□□□ 1.43
TRIM50Q86XT4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
TRIM50Q86XT4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.95■■□□□ 1.43
TRIM50Q86XT4 C9orf163-202ENST00000624034 2573 ntBASIC23.95■■□□□ 1.42
TRIM50Q86XT4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.95■■□□□ 1.42
TRIM50Q86XT4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.95■■□□□ 1.42
TRIM50Q86XT4 MIR663A-201ENST00000385250 93 ntBASIC23.95■■□□□ 1.42
TRIM50Q86XT4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM50Q86XT4 AC006970.2-201ENST00000450065 779 ntBASIC23.95■■□□□ 1.42
TRIM50Q86XT4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.95■■□□□ 1.42
TRIM50Q86XT4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.95■■□□□ 1.42
TRIM50Q86XT4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.95■■□□□ 1.42
TRIM50Q86XT4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.95■■□□□ 1.42
TRIM50Q86XT4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.95■■□□□ 1.42
TRIM50Q86XT4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM50Q86XT4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM50Q86XT4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.94■■□□□ 1.42
TRIM50Q86XT4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.94■■□□□ 1.42
TRIM50Q86XT4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM50Q86XT4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM50Q86XT4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.94■■□□□ 1.42
TRIM50Q86XT4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.94■■□□□ 1.42
TRIM50Q86XT4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM50Q86XT4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
TRIM50Q86XT4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM50Q86XT4 AP006587.3-201ENST00000525742 1516 ntBASIC23.94■■□□□ 1.42
TRIM50Q86XT4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM50Q86XT4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM50Q86XT4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM50Q86XT4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.93■■□□□ 1.42
TRIM50Q86XT4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.93■■□□□ 1.42
TRIM50Q86XT4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.93■■□□□ 1.42
TRIM50Q86XT4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
TRIM50Q86XT4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.93■■□□□ 1.42
TRIM50Q86XT4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.93■■□□□ 1.42
TRIM50Q86XT4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
TRIM50Q86XT4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.93■■□□□ 1.42
TRIM50Q86XT4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.93■■□□□ 1.42
TRIM50Q86XT4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.93■■□□□ 1.42
TRIM50Q86XT4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.93■■□□□ 1.42
TRIM50Q86XT4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM50Q86XT4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM50Q86XT4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM50Q86XT4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM50Q86XT4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM50Q86XT4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.92■■□□□ 1.42
TRIM50Q86XT4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM50Q86XT4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM50Q86XT4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM50Q86XT4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms