Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 AC009831.1-201ENST00000580420 1582 ntBASIC17.81■□□□□ 0.44
ZNF546Q86UE3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF546Q86UE3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ZNF546Q86UE3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF546Q86UE3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF546Q86UE3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF546Q86UE3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF546Q86UE3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF546Q86UE3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF546Q86UE3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF546Q86UE3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF546Q86UE3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF546Q86UE3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF546Q86UE3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF546Q86UE3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF546Q86UE3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.8■□□□□ 0.44
ZNF546Q86UE3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF546Q86UE3 AC018755.3-202ENST00000596210 929 ntBASIC17.8■□□□□ 0.44
ZNF546Q86UE3 AC133552.2-201ENST00000619106 1032 ntBASIC17.8■□□□□ 0.44
ZNF546Q86UE3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF546Q86UE3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
ZNF546Q86UE3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF546Q86UE3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.8■□□□□ 0.44
ZNF546Q86UE3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ZNF546Q86UE3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF546Q86UE3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF546Q86UE3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF546Q86UE3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.79■□□□□ 0.44
ZNF546Q86UE3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF546Q86UE3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF546Q86UE3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF546Q86UE3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF546Q86UE3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.79■□□□□ 0.44
ZNF546Q86UE3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
ZNF546Q86UE3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF546Q86UE3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ZNF546Q86UE3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF546Q86UE3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ZNF546Q86UE3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ZNF546Q86UE3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF546Q86UE3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
ZNF546Q86UE3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF546Q86UE3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
ZNF546Q86UE3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF546Q86UE3 GPX1-201ENST00000419349 1106 ntBASIC17.78■□□□□ 0.44
ZNF546Q86UE3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF546Q86UE3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF546Q86UE3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF546Q86UE3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF546Q86UE3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF546Q86UE3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF546Q86UE3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.77■□□□□ 0.44
ZNF546Q86UE3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF546Q86UE3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ZNF546Q86UE3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.77■□□□□ 0.44
ZNF546Q86UE3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF546Q86UE3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF546Q86UE3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
ZNF546Q86UE3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.77■□□□□ 0.44
ZNF546Q86UE3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ZNF546Q86UE3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.77■□□□□ 0.43
ZNF546Q86UE3 LINC01960-201ENST00000563759 1884 ntBASIC17.77■□□□□ 0.43
ZNF546Q86UE3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
ZNF546Q86UE3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
ZNF546Q86UE3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.77■□□□□ 0.43
ZNF546Q86UE3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ZNF546Q86UE3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms