Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.67■■□□□ 1.06
PACS1Q6VY07 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
PACS1Q6VY07 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PACS1Q6VY07 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
PACS1Q6VY07 AC010525.1-201ENST00000585559 441 ntBASIC21.67■■□□□ 1.06
PACS1Q6VY07 AC068587.7-201ENST00000641602 218 ntBASIC21.67■■□□□ 1.06
PACS1Q6VY07 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PACS1Q6VY07 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PACS1Q6VY07 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PACS1Q6VY07 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PACS1Q6VY07 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PACS1Q6VY07 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
PACS1Q6VY07 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PACS1Q6VY07 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PACS1Q6VY07 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PACS1Q6VY07 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PACS1Q6VY07 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PACS1Q6VY07 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PACS1Q6VY07 SLC47A1P1-202ENST00000449666 945 ntBASIC21.66■■□□□ 1.06
PACS1Q6VY07 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.66■■□□□ 1.06
PACS1Q6VY07 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.66■■□□□ 1.06
PACS1Q6VY07 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.66■■□□□ 1.06
PACS1Q6VY07 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PACS1Q6VY07 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PACS1Q6VY07 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PACS1Q6VY07 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PACS1Q6VY07 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PACS1Q6VY07 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PACS1Q6VY07 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.65■■□□□ 1.06
PACS1Q6VY07 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PACS1Q6VY07 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.65■■□□□ 1.06
PACS1Q6VY07 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.65■■□□□ 1.06
PACS1Q6VY07 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
PACS1Q6VY07 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.65■■□□□ 1.06
PACS1Q6VY07 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
PACS1Q6VY07 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.65■■□□□ 1.06
PACS1Q6VY07 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PACS1Q6VY07 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PACS1Q6VY07 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
PACS1Q6VY07 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.65■■□□□ 1.06
PACS1Q6VY07 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PACS1Q6VY07 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PACS1Q6VY07 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.64■■□□□ 1.06
PACS1Q6VY07 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PACS1Q6VY07 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
PACS1Q6VY07 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PACS1Q6VY07 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.06
PACS1Q6VY07 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PACS1Q6VY07 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PACS1Q6VY07 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PACS1Q6VY07 BX842568.3-201ENST00000418104 571 ntBASIC21.64■■□□□ 1.05
PACS1Q6VY07 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.64■■□□□ 1.05
PACS1Q6VY07 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.64■■□□□ 1.05
PACS1Q6VY07 PBX2P1-201ENST00000493219 1291 ntBASIC21.64■■□□□ 1.05
PACS1Q6VY07 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PACS1Q6VY07 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PACS1Q6VY07 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
PACS1Q6VY07 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PACS1Q6VY07 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PACS1Q6VY07 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PACS1Q6VY07 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.63■■□□□ 1.05
PACS1Q6VY07 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PACS1Q6VY07 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.63■■□□□ 1.05
PACS1Q6VY07 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PACS1Q6VY07 AC079089.2-201ENST00000531211 1277 ntBASIC21.63■■□□□ 1.05
PACS1Q6VY07 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.63■■□□□ 1.05
PACS1Q6VY07 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PACS1Q6VY07 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PACS1Q6VY07 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PACS1Q6VY07 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.63■■□□□ 1.05
PACS1Q6VY07 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PACS1Q6VY07 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PACS1Q6VY07 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PACS1Q6VY07 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PACS1Q6VY07 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PACS1Q6VY07 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PACS1Q6VY07 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PACS1Q6VY07 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PACS1Q6VY07 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.62■■□□□ 1.05
PACS1Q6VY07 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.62■■□□□ 1.05
PACS1Q6VY07 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PACS1Q6VY07 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PACS1Q6VY07 EDA-201ENST00000338901 1233 ntBASIC21.62■■□□□ 1.05
PACS1Q6VY07 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.62■■□□□ 1.05
PACS1Q6VY07 AC133561.4-201ENST00000566112 224 ntBASIC21.62■■□□□ 1.05
PACS1Q6VY07 AL139246.5-201ENST00000606645 996 ntBASIC21.62■■□□□ 1.05
PACS1Q6VY07 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.62■■□□□ 1.05
PACS1Q6VY07 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.62■■□□□ 1.05
PACS1Q6VY07 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PACS1Q6VY07 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PACS1Q6VY07 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PACS1Q6VY07 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PACS1Q6VY07 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PACS1Q6VY07 AP005435.1-201ENST00000529293 1178 ntBASIC21.61■■□□□ 1.05
PACS1Q6VY07 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.61■■□□□ 1.05
PACS1Q6VY07 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PACS1Q6VY07 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PACS1Q6VY07 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PACS1Q6VY07 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.61■■□□□ 1.05
PACS1Q6VY07 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms