Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA2Q6UWI4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC16.72■□□□□ 0.27
SHISA2Q6UWI4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA2Q6UWI4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHISA2Q6UWI4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SHISA2Q6UWI4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA2Q6UWI4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA2Q6UWI4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA2Q6UWI4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.71■□□□□ 0.27
SHISA2Q6UWI4 AL512625.2-201ENST00000417533 625 ntBASIC16.71■□□□□ 0.27
SHISA2Q6UWI4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.71■□□□□ 0.27
SHISA2Q6UWI4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.71■□□□□ 0.27
SHISA2Q6UWI4 AC097658.1-201ENST00000475555 843 ntBASIC16.71■□□□□ 0.27
SHISA2Q6UWI4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.71■□□□□ 0.27
SHISA2Q6UWI4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.71■□□□□ 0.27
SHISA2Q6UWI4 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.71■□□□□ 0.27
SHISA2Q6UWI4 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.71■□□□□ 0.27
SHISA2Q6UWI4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA2Q6UWI4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA2Q6UWI4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA2Q6UWI4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA2Q6UWI4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA2Q6UWI4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHISA2Q6UWI4 AC068338.2-201ENST00000563278 1430 ntBASIC16.7■□□□□ 0.26
SHISA2Q6UWI4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SHISA2Q6UWI4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHISA2Q6UWI4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SHISA2Q6UWI4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHISA2Q6UWI4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHISA2Q6UWI4 AC007322.4-201ENST00000509611 723 ntBASIC16.7■□□□□ 0.26
SHISA2Q6UWI4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.7■□□□□ 0.26
SHISA2Q6UWI4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHISA2Q6UWI4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHISA2Q6UWI4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHISA2Q6UWI4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC16.7■□□□□ 0.26
SHISA2Q6UWI4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SHISA2Q6UWI4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHISA2Q6UWI4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.69■□□□□ 0.26
SHISA2Q6UWI4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.69■□□□□ 0.26
SHISA2Q6UWI4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SHISA2Q6UWI4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHISA2Q6UWI4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SHISA2Q6UWI4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.69■□□□□ 0.26
SHISA2Q6UWI4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.69■□□□□ 0.26
SHISA2Q6UWI4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.69■□□□□ 0.26
SHISA2Q6UWI4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
SHISA2Q6UWI4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHISA2Q6UWI4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA2Q6UWI4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA2Q6UWI4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA2Q6UWI4 AL596275.1-201ENST00000423464 877 ntBASIC16.68■□□□□ 0.26
SHISA2Q6UWI4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.68■□□□□ 0.26
SHISA2Q6UWI4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.68■□□□□ 0.26
SHISA2Q6UWI4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SHISA2Q6UWI4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.68■□□□□ 0.26
SHISA2Q6UWI4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.68■□□□□ 0.26
SHISA2Q6UWI4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.68■□□□□ 0.26
SHISA2Q6UWI4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.68■□□□□ 0.26
SHISA2Q6UWI4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.68■□□□□ 0.26
SHISA2Q6UWI4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.68■□□□□ 0.26
SHISA2Q6UWI4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC16.68■□□□□ 0.26
SHISA2Q6UWI4 AC006058.3-201ENST00000606217 1069 ntBASIC16.68■□□□□ 0.26
SHISA2Q6UWI4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHISA2Q6UWI4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
SHISA2Q6UWI4 AC079630.1-202ENST00000618127 1840 ntBASIC16.68■□□□□ 0.26
SHISA2Q6UWI4 RNF165-205ENST00000588679 2904 ntBASIC16.67■□□□□ 0.26
SHISA2Q6UWI4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHISA2Q6UWI4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHISA2Q6UWI4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHISA2Q6UWI4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.67■□□□□ 0.26
SHISA2Q6UWI4 BX276092.2-201ENST00000417668 665 ntBASIC16.67■□□□□ 0.26
SHISA2Q6UWI4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.67■□□□□ 0.26
SHISA2Q6UWI4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHISA2Q6UWI4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHISA2Q6UWI4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.67■□□□□ 0.26
SHISA2Q6UWI4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHISA2Q6UWI4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA2Q6UWI4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA2Q6UWI4 AC055733.4-201ENST00000638462 1354 ntBASIC16.66■□□□□ 0.26
SHISA2Q6UWI4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA2Q6UWI4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA2Q6UWI4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA2Q6UWI4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SHISA2Q6UWI4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.66■□□□□ 0.26
SHISA2Q6UWI4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
SHISA2Q6UWI4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
SHISA2Q6UWI4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.66■□□□□ 0.26
SHISA2Q6UWI4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SHISA2Q6UWI4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA2Q6UWI4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA2Q6UWI4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA2Q6UWI4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.66■□□□□ 0.26
SHISA2Q6UWI4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA2Q6UWI4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA2Q6UWI4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA2Q6UWI4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SHISA2Q6UWI4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA2Q6UWI4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA2Q6UWI4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA2Q6UWI4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms