Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
MRPL54Q6P161 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL54Q6P161 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL54Q6P161 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
MRPL54Q6P161 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.18■□□□□ 0.18
MRPL54Q6P161 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL54Q6P161 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL54Q6P161 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL54Q6P161 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL54Q6P161 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.17■□□□□ 0.18
MRPL54Q6P161 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
MRPL54Q6P161 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL54Q6P161 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL54Q6P161 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL54Q6P161 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL54Q6P161 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.17■□□□□ 0.18
MRPL54Q6P161 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
MRPL54Q6P161 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.17■□□□□ 0.18
MRPL54Q6P161 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL54Q6P161 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL54Q6P161 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL54Q6P161 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL54Q6P161 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL54Q6P161 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.17■□□□□ 0.18
MRPL54Q6P161 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL54Q6P161 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.17■□□□□ 0.18
MRPL54Q6P161 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL54Q6P161 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL54Q6P161 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL54Q6P161 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
MRPL54Q6P161 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL54Q6P161 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
MRPL54Q6P161 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.16■□□□□ 0.18
MRPL54Q6P161 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL54Q6P161 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
MRPL54Q6P161 RPS2P7-201ENST00000447334 885 ntBASIC16.16■□□□□ 0.18
MRPL54Q6P161 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.16■□□□□ 0.18
MRPL54Q6P161 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.16■□□□□ 0.18
MRPL54Q6P161 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
MRPL54Q6P161 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL54Q6P161 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.16■□□□□ 0.18
MRPL54Q6P161 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.16■□□□□ 0.18
MRPL54Q6P161 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.16■□□□□ 0.18
MRPL54Q6P161 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.16■□□□□ 0.18
MRPL54Q6P161 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL54Q6P161 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL54Q6P161 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
MRPL54Q6P161 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
MRPL54Q6P161 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.15■□□□□ 0.18
MRPL54Q6P161 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL54Q6P161 FEM1AP1-201ENST00000431297 1995 ntBASIC16.15■□□□□ 0.18
MRPL54Q6P161 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.15■□□□□ 0.18
MRPL54Q6P161 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL54Q6P161 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL54Q6P161 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL54Q6P161 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.15■□□□□ 0.18
MRPL54Q6P161 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.15■□□□□ 0.18
MRPL54Q6P161 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.15■□□□□ 0.18
MRPL54Q6P161 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.15■□□□□ 0.18
MRPL54Q6P161 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL54Q6P161 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
MRPL54Q6P161 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL54Q6P161 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL54Q6P161 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL54Q6P161 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL54Q6P161 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
MRPL54Q6P161 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
MRPL54Q6P161 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL54Q6P161 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL54Q6P161 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL54Q6P161 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL54Q6P161 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL54Q6P161 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL54Q6P161 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL54Q6P161 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL54Q6P161 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
MRPL54Q6P161 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL54Q6P161 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
MRPL54Q6P161 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL54Q6P161 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL54Q6P161 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL54Q6P161 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.14■□□□□ 0.17
MRPL54Q6P161 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL54Q6P161 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL54Q6P161 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
MRPL54Q6P161 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL54Q6P161 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL54Q6P161 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL54Q6P161 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.13■□□□□ 0.17
MRPL54Q6P161 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MRPL54Q6P161 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MRPL54Q6P161 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MRPL54Q6P161 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.13■□□□□ 0.17
MRPL54Q6P161 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MRPL54Q6P161 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
MRPL54Q6P161 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.13■□□□□ 0.17
MRPL54Q6P161 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MRPL54Q6P161 ZNRF2P2-203ENST00000454624 420 ntBASIC16.13■□□□□ 0.17
MRPL54Q6P161 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
MRPL54Q6P161 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms