Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DQA1Q5Y7H0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.99■□□□□ 0.79
HLA-DQA1Q5Y7H0 AP004607.7-201ENST00000527152 1677 ntBASIC19.99■□□□□ 0.79
HLA-DQA1Q5Y7H0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DQA1Q5Y7H0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
HLA-DQA1Q5Y7H0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DQA1Q5Y7H0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HLA-DQA1Q5Y7H0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.99■□□□□ 0.79
HLA-DQA1Q5Y7H0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.99■□□□□ 0.79
HLA-DQA1Q5Y7H0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQA1Q5Y7H0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
HLA-DQA1Q5Y7H0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQA1Q5Y7H0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.98■□□□□ 0.79
HLA-DQA1Q5Y7H0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
HLA-DQA1Q5Y7H0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQA1Q5Y7H0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQA1Q5Y7H0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQA1Q5Y7H0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.98■□□□□ 0.79
HLA-DQA1Q5Y7H0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQA1Q5Y7H0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.98■□□□□ 0.79
HLA-DQA1Q5Y7H0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.98■□□□□ 0.79
HLA-DQA1Q5Y7H0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQA1Q5Y7H0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQA1Q5Y7H0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQA1Q5Y7H0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQA1Q5Y7H0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQA1Q5Y7H0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQA1Q5Y7H0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQA1Q5Y7H0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQA1Q5Y7H0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQA1Q5Y7H0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HLA-DQA1Q5Y7H0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQA1Q5Y7H0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.97■□□□□ 0.79
HLA-DQA1Q5Y7H0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQA1Q5Y7H0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
HLA-DQA1Q5Y7H0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.97■□□□□ 0.79
HLA-DQA1Q5Y7H0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HLA-DQA1Q5Y7H0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQA1Q5Y7H0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.97■□□□□ 0.79
HLA-DQA1Q5Y7H0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQA1Q5Y7H0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQA1Q5Y7H0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.96■□□□□ 0.79
HLA-DQA1Q5Y7H0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQA1Q5Y7H0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.96■□□□□ 0.79
HLA-DQA1Q5Y7H0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQA1Q5Y7H0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQA1Q5Y7H0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQA1Q5Y7H0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
HLA-DQA1Q5Y7H0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQA1Q5Y7H0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.96■□□□□ 0.79
HLA-DQA1Q5Y7H0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.96■□□□□ 0.79
HLA-DQA1Q5Y7H0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 AC027612.3-201ENST00000413684 1047 ntBASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQA1Q5Y7H0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 AC009237.3-201ENST00000393279 1427 ntBASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 AL117328.2-201ENST00000624617 1940 ntBASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.94■□□□□ 0.78
HLA-DQA1Q5Y7H0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
HLA-DQA1Q5Y7H0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms