Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.63□□□□□ -0.07
VPS13DQ5THJ4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VPS13DQ5THJ4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.63□□□□□ -0.07
VPS13DQ5THJ4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC14.63□□□□□ -0.07
VPS13DQ5THJ4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 RARRES2P4-201ENST00000514074 484 ntBASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 AC133041.1-202ENST00000642053 222 ntBASIC14.62□□□□□ -0.07
VPS13DQ5THJ4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13DQ5THJ4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13DQ5THJ4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13DQ5THJ4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13DQ5THJ4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
VPS13DQ5THJ4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13DQ5THJ4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
VPS13DQ5THJ4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC14.61□□□□□ -0.07
VPS13DQ5THJ4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13DQ5THJ4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.61□□□□□ -0.07
VPS13DQ5THJ4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14.61□□□□□ -0.07
VPS13DQ5THJ4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.61□□□□□ -0.07
VPS13DQ5THJ4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC14.61□□□□□ -0.07
VPS13DQ5THJ4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13DQ5THJ4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13DQ5THJ4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13DQ5THJ4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13DQ5THJ4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.61□□□□□ -0.07
VPS13DQ5THJ4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.61□□□□□ -0.07
VPS13DQ5THJ4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13DQ5THJ4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13DQ5THJ4 MIPEPP3-201ENST00000412105 444 ntBASIC14.6□□□□□ -0.07
VPS13DQ5THJ4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.6□□□□□ -0.07
VPS13DQ5THJ4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS13DQ5THJ4 LINC01960-201ENST00000563759 1884 ntBASIC14.6□□□□□ -0.07
VPS13DQ5THJ4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS13DQ5THJ4 AC092068.2-201ENST00000590491 1708 ntBASIC14.6□□□□□ -0.07
VPS13DQ5THJ4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS13DQ5THJ4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VPS13DQ5THJ4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.6□□□□□ -0.07
VPS13DQ5THJ4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS13DQ5THJ4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC14.6□□□□□ -0.07
VPS13DQ5THJ4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 AC138907.5-202ENST00000569484 235 ntBASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 AC013268.1-206ENST00000638368 961 ntBASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 AC112229.1-201ENST00000639295 961 ntBASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 KRT18P29-201ENST00000397031 1267 ntBASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.59□□□□□ -0.07
VPS13DQ5THJ4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
VPS13DQ5THJ4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VPS13DQ5THJ4 KRT18P20-201ENST00000548986 1279 ntBASIC14.58□□□□□ -0.07
VPS13DQ5THJ4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS13DQ5THJ4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VPS13DQ5THJ4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VPS13DQ5THJ4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
VPS13DQ5THJ4 AC073648.6-201ENST00000641589 218 ntBASIC14.58□□□□□ -0.08
VPS13DQ5THJ4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS13DQ5THJ4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
VPS13DQ5THJ4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS13DQ5THJ4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
VPS13DQ5THJ4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
VPS13DQ5THJ4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms