Protein–RNA interactions for Protein: Q5EBM4

ZNF542P, Putative zinc finger protein 542, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF542PQ5EBM4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF542PQ5EBM4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF542PQ5EBM4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF542PQ5EBM4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF542PQ5EBM4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF542PQ5EBM4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF542PQ5EBM4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF542PQ5EBM4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF542PQ5EBM4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.09■□□□□ 0.97
ZNF542PQ5EBM4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF542PQ5EBM4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.09■□□□□ 0.97
ZNF542PQ5EBM4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF542PQ5EBM4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF542PQ5EBM4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ZNF542PQ5EBM4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF542PQ5EBM4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.09■□□□□ 0.97
ZNF542PQ5EBM4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF542PQ5EBM4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF542PQ5EBM4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF542PQ5EBM4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.09■□□□□ 0.97
ZNF542PQ5EBM4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
ZNF542PQ5EBM4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF542PQ5EBM4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
ZNF542PQ5EBM4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.08■□□□□ 0.97
ZNF542PQ5EBM4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.08■□□□□ 0.97
ZNF542PQ5EBM4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.08■□□□□ 0.97
ZNF542PQ5EBM4 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.08■□□□□ 0.97
ZNF542PQ5EBM4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZNF542PQ5EBM4 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.08■□□□□ 0.96
ZNF542PQ5EBM4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.08■□□□□ 0.96
ZNF542PQ5EBM4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZNF542PQ5EBM4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ZNF542PQ5EBM4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF542PQ5EBM4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF542PQ5EBM4 NCF1B-203ENST00000435988 1254 ntBASIC21.07■□□□□ 0.96
ZNF542PQ5EBM4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF542PQ5EBM4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF542PQ5EBM4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF542PQ5EBM4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF542PQ5EBM4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF542PQ5EBM4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF542PQ5EBM4 AC087742.1-201ENST00000575880 1738 ntBASIC21.07■□□□□ 0.96
ZNF542PQ5EBM4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF542PQ5EBM4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF542PQ5EBM4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF542PQ5EBM4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF542PQ5EBM4 DUX4L16-201ENST00000555130 1264 ntBASIC21.06■□□□□ 0.96
ZNF542PQ5EBM4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ZNF542PQ5EBM4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.05■□□□□ 0.96
ZNF542PQ5EBM4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF542PQ5EBM4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.05■□□□□ 0.96
ZNF542PQ5EBM4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.05■□□□□ 0.96
ZNF542PQ5EBM4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF542PQ5EBM4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.05■□□□□ 0.96
ZNF542PQ5EBM4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.05■□□□□ 0.96
ZNF542PQ5EBM4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.05■□□□□ 0.96
ZNF542PQ5EBM4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.05■□□□□ 0.96
ZNF542PQ5EBM4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ZNF542PQ5EBM4 MYCNOS-205ENST00000641950 531 ntBASIC21.05■□□□□ 0.96
ZNF542PQ5EBM4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
ZNF542PQ5EBM4 AC137767.1-201ENST00000602918 1920 ntBASIC21.05■□□□□ 0.96
ZNF542PQ5EBM4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.05■□□□□ 0.96
ZNF542PQ5EBM4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF542PQ5EBM4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF542PQ5EBM4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF542PQ5EBM4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF542PQ5EBM4 GPX1P1-201ENST00000388829 606 ntBASIC21.04■□□□□ 0.96
ZNF542PQ5EBM4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.04■□□□□ 0.96
ZNF542PQ5EBM4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF542PQ5EBM4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF542PQ5EBM4 AL050303.2-201ENST00000619798 666 ntBASIC21.04■□□□□ 0.96
ZNF542PQ5EBM4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF542PQ5EBM4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF542PQ5EBM4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF542PQ5EBM4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF542PQ5EBM4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF542PQ5EBM4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
ZNF542PQ5EBM4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF542PQ5EBM4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.03■□□□□ 0.96
ZNF542PQ5EBM4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ZNF542PQ5EBM4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.03■□□□□ 0.96
ZNF542PQ5EBM4 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.03■□□□□ 0.96
ZNF542PQ5EBM4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.03■□□□□ 0.96
ZNF542PQ5EBM4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF542PQ5EBM4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.03■□□□□ 0.96
ZNF542PQ5EBM4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.03■□□□□ 0.96
ZNF542PQ5EBM4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF542PQ5EBM4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.03■□□□□ 0.96
ZNF542PQ5EBM4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF542PQ5EBM4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF542PQ5EBM4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF542PQ5EBM4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF542PQ5EBM4 AC007322.1-201ENST00000426983 750 ntBASIC21.02■□□□□ 0.96
ZNF542PQ5EBM4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.02■□□□□ 0.96
ZNF542PQ5EBM4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.02■□□□□ 0.96
ZNF542PQ5EBM4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
ZNF542PQ5EBM4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
ZNF542PQ5EBM4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF542PQ5EBM4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF542PQ5EBM4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms