Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFX4Q33E94 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.91■□□□□ 0.78
RFX4Q33E94 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.91■□□□□ 0.78
RFX4Q33E94 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.91■□□□□ 0.78
RFX4Q33E94 AC092028.1-203ENST00000608262 953 ntBASIC19.91■□□□□ 0.78
RFX4Q33E94 AF106564.1-201ENST00000607058 2553 ntBASIC19.91■□□□□ 0.78
RFX4Q33E94 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
RFX4Q33E94 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFX4Q33E94 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFX4Q33E94 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RFX4Q33E94 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFX4Q33E94 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFX4Q33E94 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX4Q33E94 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX4Q33E94 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.9■□□□□ 0.78
RFX4Q33E94 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFX4Q33E94 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RFX4Q33E94 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
RFX4Q33E94 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.9■□□□□ 0.78
RFX4Q33E94 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFX4Q33E94 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX4Q33E94 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX4Q33E94 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX4Q33E94 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFX4Q33E94 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
RFX4Q33E94 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX4Q33E94 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RFX4Q33E94 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFX4Q33E94 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RFX4Q33E94 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFX4Q33E94 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFX4Q33E94 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RFX4Q33E94 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.89■□□□□ 0.77
RFX4Q33E94 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.89■□□□□ 0.77
RFX4Q33E94 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
RFX4Q33E94 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
RFX4Q33E94 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.89■□□□□ 0.77
RFX4Q33E94 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
RFX4Q33E94 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX4Q33E94 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.88■□□□□ 0.77
RFX4Q33E94 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX4Q33E94 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX4Q33E94 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX4Q33E94 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX4Q33E94 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RFX4Q33E94 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.88■□□□□ 0.77
RFX4Q33E94 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RFX4Q33E94 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFX4Q33E94 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFX4Q33E94 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.88■□□□□ 0.77
RFX4Q33E94 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX4Q33E94 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFX4Q33E94 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.88■□□□□ 0.77
RFX4Q33E94 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.88■□□□□ 0.77
RFX4Q33E94 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX4Q33E94 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.88■□□□□ 0.77
RFX4Q33E94 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RFX4Q33E94 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX4Q33E94 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RFX4Q33E94 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX4Q33E94 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RFX4Q33E94 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RFX4Q33E94 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFX4Q33E94 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RFX4Q33E94 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
RFX4Q33E94 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFX4Q33E94 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX4Q33E94 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX4Q33E94 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RFX4Q33E94 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFX4Q33E94 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX4Q33E94 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFX4Q33E94 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFX4Q33E94 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFX4Q33E94 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
RFX4Q33E94 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RFX4Q33E94 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFX4Q33E94 KRT125P-201ENST00000546827 989 ntBASIC19.86■□□□□ 0.77
RFX4Q33E94 Z92544.1-202ENST00000571933 1220 ntBASIC19.86■□□□□ 0.77
RFX4Q33E94 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.86■□□□□ 0.77
RFX4Q33E94 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFX4Q33E94 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFX4Q33E94 AC009102.2-201ENST00000606772 1639 ntBASIC19.86■□□□□ 0.77
RFX4Q33E94 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFX4Q33E94 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.86■□□□□ 0.77
RFX4Q33E94 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFX4Q33E94 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX4Q33E94 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX4Q33E94 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX4Q33E94 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.85■□□□□ 0.77
RFX4Q33E94 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX4Q33E94 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFX4Q33E94 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.85■□□□□ 0.77
RFX4Q33E94 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.85■□□□□ 0.77
RFX4Q33E94 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX4Q33E94 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.85■□□□□ 0.77
RFX4Q33E94 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFX4Q33E94 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RFX4Q33E94 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RFX4Q33E94 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms