Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 MIR6084-201ENST00000622012 110 ntBASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D28Q2M2D7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D28Q2M2D7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D28Q2M2D7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D28Q2M2D7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TBC1D28Q2M2D7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D28Q2M2D7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D28Q2M2D7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TBC1D28Q2M2D7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D28Q2M2D7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TBC1D28Q2M2D7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.65■□□□□ 0.58
TBC1D28Q2M2D7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D28Q2M2D7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TBC1D28Q2M2D7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.65■□□□□ 0.58
TBC1D28Q2M2D7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D28Q2M2D7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TBC1D28Q2M2D7 AC009237.3-201ENST00000393279 1427 ntBASIC18.65■□□□□ 0.58
TBC1D28Q2M2D7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.65■□□□□ 0.58
TBC1D28Q2M2D7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TBC1D28Q2M2D7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.64■□□□□ 0.57
TBC1D28Q2M2D7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.64■□□□□ 0.57
TBC1D28Q2M2D7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.64■□□□□ 0.57
TBC1D28Q2M2D7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D28Q2M2D7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D28Q2M2D7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.64■□□□□ 0.57
TBC1D28Q2M2D7 AC027612.3-201ENST00000413684 1047 ntBASIC18.64■□□□□ 0.57
TBC1D28Q2M2D7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.64■□□□□ 0.57
TBC1D28Q2M2D7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D28Q2M2D7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D28Q2M2D7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TBC1D28Q2M2D7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D28Q2M2D7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D28Q2M2D7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D28Q2M2D7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D28Q2M2D7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.64■□□□□ 0.57
TBC1D28Q2M2D7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D28Q2M2D7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D28Q2M2D7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D28Q2M2D7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D28Q2M2D7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
TBC1D28Q2M2D7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D28Q2M2D7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D28Q2M2D7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D28Q2M2D7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.63■□□□□ 0.57
TBC1D28Q2M2D7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D28Q2M2D7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.63■□□□□ 0.57
TBC1D28Q2M2D7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.63■□□□□ 0.57
TBC1D28Q2M2D7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D28Q2M2D7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D28Q2M2D7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D28Q2M2D7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D28Q2M2D7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.62■□□□□ 0.57
TBC1D28Q2M2D7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D28Q2M2D7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D28Q2M2D7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D28Q2M2D7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.62■□□□□ 0.57
TBC1D28Q2M2D7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TBC1D28Q2M2D7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D28Q2M2D7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.62■□□□□ 0.57
TBC1D28Q2M2D7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D28Q2M2D7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.62■□□□□ 0.57
TBC1D28Q2M2D7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D28Q2M2D7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms