Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PDS5AQ29RF7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PDS5AQ29RF7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PDS5AQ29RF7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC25.93■■□□□ 1.74
PDS5AQ29RF7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PDS5AQ29RF7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PDS5AQ29RF7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PDS5AQ29RF7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC25.92■■□□□ 1.74
PDS5AQ29RF7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC25.92■■□□□ 1.74
PDS5AQ29RF7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC25.92■■□□□ 1.74
PDS5AQ29RF7 KRT18P20-201ENST00000548986 1279 ntBASIC25.92■■□□□ 1.74
PDS5AQ29RF7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC25.92■■□□□ 1.74
PDS5AQ29RF7 AC053503.5-201ENST00000601508 636 ntBASIC25.92■■□□□ 1.74
PDS5AQ29RF7 AC011767.1-201ENST00000617410 1153 ntBASIC25.92■■□□□ 1.74
PDS5AQ29RF7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
PDS5AQ29RF7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC25.92■■□□□ 1.74
PDS5AQ29RF7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC25.92■■□□□ 1.74
PDS5AQ29RF7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC25.92■■□□□ 1.74
PDS5AQ29RF7 AC127496.7-201ENST00000625110 1798 ntBASIC25.92■■□□□ 1.74
PDS5AQ29RF7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PDS5AQ29RF7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
PDS5AQ29RF7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PDS5AQ29RF7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PDS5AQ29RF7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC25.91■■□□□ 1.74
PDS5AQ29RF7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC25.91■■□□□ 1.74
PDS5AQ29RF7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.91■■□□□ 1.74
PDS5AQ29RF7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PDS5AQ29RF7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC25.91■■□□□ 1.74
PDS5AQ29RF7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
PDS5AQ29RF7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PDS5AQ29RF7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PDS5AQ29RF7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
PDS5AQ29RF7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PDS5AQ29RF7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PDS5AQ29RF7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PDS5AQ29RF7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PDS5AQ29RF7 AC026185.1-201ENST00000445748 174 ntBASIC25.9■■□□□ 1.74
PDS5AQ29RF7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PDS5AQ29RF7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PDS5AQ29RF7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
PDS5AQ29RF7 UBE2DNL-204ENST00000602536 740 ntBASIC25.9■■□□□ 1.74
PDS5AQ29RF7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PDS5AQ29RF7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
PDS5AQ29RF7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC25.9■■□□□ 1.74
PDS5AQ29RF7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PDS5AQ29RF7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PDS5AQ29RF7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PDS5AQ29RF7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PDS5AQ29RF7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.89■■□□□ 1.74
PDS5AQ29RF7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC25.89■■□□□ 1.74
PDS5AQ29RF7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC25.89■■□□□ 1.74
PDS5AQ29RF7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PDS5AQ29RF7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.73
PDS5AQ29RF7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
PDS5AQ29RF7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PDS5AQ29RF7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PDS5AQ29RF7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC25.89■■□□□ 1.73
PDS5AQ29RF7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PDS5AQ29RF7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDS5AQ29RF7 ID1-201ENST00000376105 1233 ntBASIC25.88■■□□□ 1.73
PDS5AQ29RF7 MDK-213ENST00000617138 635 ntTSL 2 BASIC25.88■■□□□ 1.73
PDS5AQ29RF7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC25.88■■□□□ 1.73
PDS5AQ29RF7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDS5AQ29RF7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDS5AQ29RF7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PDS5AQ29RF7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PDS5AQ29RF7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDS5AQ29RF7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDS5AQ29RF7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC25.88■■□□□ 1.73
PDS5AQ29RF7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDS5AQ29RF7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PDS5AQ29RF7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
PDS5AQ29RF7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PDS5AQ29RF7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.88■■□□□ 1.73
PDS5AQ29RF7 MYCNOS-205ENST00000641950 531 ntBASIC25.88■■□□□ 1.73
PDS5AQ29RF7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.87■■□□□ 1.73
PDS5AQ29RF7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PDS5AQ29RF7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
PDS5AQ29RF7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.87■■□□□ 1.73
PDS5AQ29RF7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PDS5AQ29RF7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PDS5AQ29RF7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
PDS5AQ29RF7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC25.87■■□□□ 1.73
PDS5AQ29RF7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC25.87■■□□□ 1.73
PDS5AQ29RF7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PDS5AQ29RF7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC25.86■■□□□ 1.73
PDS5AQ29RF7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.86■■□□□ 1.73
PDS5AQ29RF7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDS5AQ29RF7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDS5AQ29RF7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PDS5AQ29RF7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDS5AQ29RF7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
PDS5AQ29RF7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDS5AQ29RF7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC25.86■■□□□ 1.73
PDS5AQ29RF7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC25.86■■□□□ 1.73
PDS5AQ29RF7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC25.86■■□□□ 1.73
PDS5AQ29RF7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.85■■□□□ 1.73
PDS5AQ29RF7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.85■■□□□ 1.73
PDS5AQ29RF7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PDS5AQ29RF7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms