Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 TAF1YGR274C 3201 nt3.51□□□□□ -1.85
DNL4Q08387 TOS8YGL096W 831 nt3.51□□□□□ -1.85
DNL4Q08387 YHR180WYHR180W 492 nt3.51□□□□□ -1.85
DNL4Q08387 IRC25YLR021W 540 nt3.51□□□□□ -1.85
DNL4Q08387 SDO1YLR022C 753 nt3.51□□□□□ -1.85
DNL4Q08387 YMR178WYMR178W 825 nt3.51□□□□□ -1.85
DNL4Q08387 YOL038C-AYOL038C-A 96 nt3.51□□□□□ -1.85
DNL4Q08387 MCM16YPR046W 546 nt3.51□□□□□ -1.85
DNL4Q08387 AME1YBR211C 975 nt3.51□□□□□ -1.85
DNL4Q08387 MEF1YLR069C 2286 nt3.51□□□□□ -1.85
DNL4Q08387 CIT1YNR001C 1440 nt3.51□□□□□ -1.85
DNL4Q08387 EPO1YMR124W 2832 nt3.51□□□□□ -1.85
DNL4Q08387 ROM1YGR070W 3468 nt3.5□□□□□ -1.85
DNL4Q08387 RRN7YJL025W 1545 nt3.5□□□□□ -1.85
DNL4Q08387 MGR3YMR115W 1506 nt3.5□□□□□ -1.85
DNL4Q08387 RRI1YDL216C 1323 nt3.5□□□□□ -1.85
DNL4Q08387 DOA4YDR069C 2781 nt3.5□□□□□ -1.85
DNL4Q08387 YER138W-AYER138W-A 105 nt3.5□□□□□ -1.85
DNL4Q08387 YGL258W-AYGL258W-A 234 nt3.5□□□□□ -1.85
DNL4Q08387 COX23YHR116W 456 nt3.5□□□□□ -1.85
DNL4Q08387 IMP3YHR148W 552 nt3.5□□□□□ -1.85
DNL4Q08387 YLR311CYLR311C 348 nt3.5□□□□□ -1.85
DNL4Q08387 MRPS8YMR158W 468 nt3.5□□□□□ -1.85
DNL4Q08387 YBL107W-AYBL107W-A 105 nt3.5□□□□□ -1.85
DNL4Q08387 YFL040WYFL040W 1623 nt3.5□□□□□ -1.85
DNL4Q08387 ORC4YPR162C 1590 nt3.5□□□□□ -1.85
DNL4Q08387 KAR5YMR065W 1515 nt3.49□□□□□ -1.85
DNL4Q08387 FRE4YNR060W 2160 nt3.49□□□□□ -1.85
DNL4Q08387 RTT109YLL002W 1311 nt3.49□□□□□ -1.85
DNL4Q08387 USE1YGL098W 738 nt3.49□□□□□ -1.85
DNL4Q08387 MRPS35YGR165W 1038 nt3.49□□□□□ -1.85
DNL4Q08387 YGR168CYGR168C 1131 nt3.49□□□□□ -1.85
DNL4Q08387 BCD1YHR040W 1101 nt3.49□□□□□ -1.85
DNL4Q08387 tV(CAC)DtV(CAC)D 73 nt3.49□□□□□ -1.85
DNL4Q08387 tV(CAC)HtV(CAC)H 73 nt3.49□□□□□ -1.85
DNL4Q08387 YIR040CYIR040C 333 nt3.49□□□□□ -1.85
DNL4Q08387 DID4YKL002W 699 nt3.49□□□□□ -1.85
DNL4Q08387 NIT3YLR351C 876 nt3.49□□□□□ -1.85
DNL4Q08387 SIL1YOL031C 1266 nt3.49□□□□□ -1.85
DNL4Q08387 PGS1YCL004W 1566 nt3.49□□□□□ -1.85
DNL4Q08387 RPN1YHR027C 2982 nt3.49□□□□□ -1.85
DNL4Q08387 STE6YKL209C 3873 nt3.49□□□□□ -1.85
DNL4Q08387 DSF2YBR007C 2211 nt3.48□□□□□ -1.85
DNL4Q08387 NUP60YAR002W 1620 nt3.48□□□□□ -1.85
DNL4Q08387 CLN2YPL256C 1638 nt3.48□□□□□ -1.85
DNL4Q08387 IMD4YML056C 1575 nt3.48□□□□□ -1.85
DNL4Q08387 DTD1YDL219W 453 nt3.48□□□□□ -1.85
DNL4Q08387 TRP4YDR354W 1143 nt3.48□□□□□ -1.85
DNL4Q08387 SEC65YML105C 822 nt3.48□□□□□ -1.85
DNL4Q08387 MTG1YMR097C 1104 nt3.48□□□□□ -1.85
DNL4Q08387 TEX1YNL253W 1269 nt3.48□□□□□ -1.85
DNL4Q08387 PNT1YOR266W 1272 nt3.48□□□□□ -1.85
DNL4Q08387 RPA43YOR340C 981 nt3.48□□□□□ -1.85
DNL4Q08387 YPR108W-AYPR108W-A 213 nt3.48□□□□□ -1.85
DNL4Q08387 DAN4YJR151C 3486 nt3.48□□□□□ -1.85
DNL4Q08387 NRP1YDL167C 2160 nt3.48□□□□□ -1.85
DNL4Q08387 YVC1YOR087W 2028 nt3.48□□□□□ -1.85
DNL4Q08387 ASI1YMR119W 1875 nt3.47□□□□□ -1.85
DNL4Q08387 TRM1YDR120C 1713 nt3.47□□□□□ -1.85
DNL4Q08387 TCP1YDR212W 1680 nt3.47□□□□□ -1.85
DNL4Q08387 RRG1YDR065W 1098 nt3.47□□□□□ -1.85
DNL4Q08387 tF(GAA)DtF(GAA)D 73 nt3.47□□□□□ -1.85
DNL4Q08387 tF(GAA)NtF(GAA)N 73 nt3.47□□□□□ -1.85
DNL4Q08387 POG1YIL122W 1056 nt3.47□□□□□ -1.85
DNL4Q08387 ANB1YJR047C 474 nt3.47□□□□□ -1.85
DNL4Q08387 LAC1YKL008C 1257 nt3.47□□□□□ -1.85
DNL4Q08387 YOR338WYOR338W 1092 nt3.47□□□□□ -1.85
DNL4Q08387 NIP7YPL211W 546 nt3.47□□□□□ -1.85
DNL4Q08387 YBR089WYBR089W 600 nt3.47□□□□□ -1.85
DNL4Q08387 TIM12YBR091C 330 nt3.47□□□□□ -1.85
DNL4Q08387 ENA2YDR039C 3276 nt3.47□□□□□ -1.85
DNL4Q08387 ENA1YDR040C 3276 nt3.47□□□□□ -1.85
DNL4Q08387 ALG1YBR110W 1350 nt3.47□□□□□ -1.85
DNL4Q08387 DSN1YIR010W 1731 nt3.47□□□□□ -1.85
DNL4Q08387 KAR1YNL188W 1302 nt3.46□□□□□ -1.85
DNL4Q08387 ULP1YPL020C 1866 nt3.46□□□□□ -1.86
DNL4Q08387 FUN12YAL035W 3009 nt3.46□□□□□ -1.86
DNL4Q08387 MGT1YDL200C 567 nt3.46□□□□□ -1.86
DNL4Q08387 FCF1YDR339C 570 nt3.46□□□□□ -1.86
DNL4Q08387 CDC26YFR036W 375 nt3.46□□□□□ -1.86
DNL4Q08387 YGR017WYGR017W 894 nt3.46□□□□□ -1.86
DNL4Q08387 YIL025CYIL025C 375 nt3.46□□□□□ -1.86
DNL4Q08387 APC9YLR102C 798 nt3.46□□□□□ -1.86
DNL4Q08387 TPM1YNL079C 600 nt3.46□□□□□ -1.86
DNL4Q08387 INN1YNL152W 1230 nt3.46□□□□□ -1.86
DNL4Q08387 MDJ2YNL328C 441 nt3.46□□□□□ -1.86
DNL4Q08387 CAT5YOR125C 702 nt3.46□□□□□ -1.86
DNL4Q08387 IAH1YOR126C 717 nt3.46□□□□□ -1.86
DNL4Q08387 snR42snR42 351 nt3.46□□□□□ -1.86
DNL4Q08387 SKP2YNL311C 2292 nt3.46□□□□□ -1.86
DNL4Q08387 ERG9YHR190W 1335 nt3.45□□□□□ -1.86
DNL4Q08387 SER3YER081W 1410 nt3.45□□□□□ -1.86
DNL4Q08387 SMI1YGR229C 1518 nt3.45□□□□□ -1.86
DNL4Q08387 RIT1YMR283C 1542 nt3.45□□□□□ -1.86
DNL4Q08387 RPA135YPR010C 3612 nt3.45□□□□□ -1.86
DNL4Q08387 YCL076WYCL076W 744 nt3.45□□□□□ -1.86
DNL4Q08387 YCR016WYCR016W 873 nt3.45□□□□□ -1.86
DNL4Q08387 SHU2YDR078C 672 nt3.45□□□□□ -1.86
DNL4Q08387 YDR124WYDR124W 975 nt3.45□□□□□ -1.86
DNL4Q08387 NKP1YDR383C 717 nt3.45□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 28.5 ms