Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 PUM1-213ENST00000524516 561 ntTSL 27.41□□□□□ -1.221e-7■■■□□ 18.3
LSM11P83369 SEPT7-209ENST00000485569 333 ntTSL 36.97□□□□□ -1.291e-7■■■□□ 18.3
LSM11P83369 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC6.92□□□□□ -1.31e-7■■■□□ 18.3
LSM11P83369 PUM1-209ENST00000480602 906 ntTSL 56.72□□□□□ -1.331e-7■■■□□ 18.3
LSM11P83369 PUM1-214ENST00000525843 4528 ntTSL 56.56□□□□□ -1.361e-7■■■□□ 18.3
LSM11P83369 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.461e-7■■■□□ 18.3
LSM11P83369 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.76□□□□□ -1.491e-7■■■□□ 18.3
LSM11P83369 SEPT7-204ENST00000425198 6952 ntTSL 55.68□□□□□ -1.51e-7■■■□□ 18.3
LSM11P83369 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.551e-7■■■□□ 18.3
LSM11P83369 SUB1-202ENST00000502453 4273 ntTSL 1 (best)4.34□□□□□ -1.713e-6■■■□□ 18.3
LSM11P83369 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.418e-9■■■□□ 18.3
LSM11P83369 NUP107-205ENST00000535718 2655 ntTSL 1 (best)10.14□□□□□ -0.792e-6■■■□□ 18.3
LSM11P83369 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.192e-6■■■□□ 18.3
LSM11P83369 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.27□□□□□ -1.412e-6■■■□□ 18.3
LSM11P83369 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.36□□□□□ -1.552e-6■■■□□ 18.3
LSM11P83369 CORO7-PAM16-203ENST00000575334 3815 ntTSL 216.68■□□□□ 0.265e-6■■■□□ 18.3
LSM11P83369 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.465e-6■■■□□ 18.3
LSM11P83369 MVD-205ENST00000562981 537 ntTSL 214.69□□□□□ -0.061e-11■■■□□ 18.3
LSM11P83369 SUPT5H-201ENST00000359191 3770 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.657e-7■■■□□ 18.2
LSM11P83369 SUPT5H-203ENST00000402194 3698 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.677e-7■■■□□ 18.2
LSM11P83369 SUPT5H-204ENST00000432763 3710 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.747e-7■■■□□ 18.2
LSM11P83369 SUPT5H-215ENST00000599117 3902 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.747e-7■■■□□ 18.2
LSM11P83369 SUPT5H-213ENST00000598725 3742 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.797e-7■■■□□ 18.2
LSM11P83369 AGAP3-221ENST00000490097 604 ntTSL 413.7□□□□□ -0.221e-6■■■□□ 18.2
LSM11P83369 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC12.25□□□□□ -0.452e-8■■■□□ 18.2
LSM11P83369 ARID3A-205ENST00000587532 1016 ntTSL 516.06■□□□□ 0.161e-6■■■□□ 18.2
LSM11P83369 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.071e-6■■■□□ 18.2
LSM11P83369 ARID3A-202ENST00000457152 549 ntTSL 511.48□□□□□ -0.571e-6■■■□□ 18.2
LSM11P83369 OAZ1-209ENST00000592787 857 ntTSL 214.35□□□□□ -0.112e-8■■■□□ 18.2
LSM11P83369 CCDC57-207ENST00000419322 2829 ntAPPRIS ALT2 TSL 514.33□□□□□ -0.124e-6■■■□□ 18.2
LSM11P83369 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.364e-6■■■□□ 18.2
LSM11P83369 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.364e-6■■■□□ 18.2
LSM11P83369 CCDC57-214ENST00000582040 330 ntTSL 312.53□□□□□ -0.44e-6■■■□□ 18.2
LSM11P83369 CCDC57-205ENST00000392346 2964 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.644e-6■■■□□ 18.2
LSM11P83369 PAN2-209ENST00000548043 4641 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.997e-10■■■□□ 18.2
LSM11P83369 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.027e-10■■■□□ 18.2
LSM11P83369 PAN2-201ENST00000257931 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.027e-10■■■□□ 18.2
LSM11P83369 PAN2-203ENST00000440411 4576 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.037e-10■■■□□ 18.2
LSM11P83369 PAN2-205ENST00000547226 2642 ntTSL 58.43□□□□□ -1.067e-10■■■□□ 18.2
LSM11P83369 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.127e-10■■■□□ 18.2
LSM11P83369 PAN2-217ENST00000551359 4685 ntTSL 56.65□□□□□ -1.347e-10■■■□□ 18.2
LSM11P83369 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.216e-9■■■□□ 18.2
LSM11P83369 PRRC2A-204ENST00000462617 1015 ntTSL 514.02□□□□□ -0.176e-9■■■□□ 18.2
LSM11P83369 PRRC2A-214ENST00000492691 1118 ntTSL 211.3□□□□□ -0.66e-9■■■□□ 18.2
LSM11P83369 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.666e-9■■■□□ 18.2
LSM11P83369 PRRC2A-209ENST00000482441 719 ntTSL 29.8□□□□□ -0.846e-9■■■□□ 18.2
LSM11P83369 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.5□□□□□ -0.413e-6■■■□□ 18.2
LSM11P83369 D2HGDH-214ENST00000473126 1612 ntTSL 1 (best)22.31■■□□□ 1.163e-7■■■□□ 18.2
LSM11P83369 D2HGDH-215ENST00000486953 2232 ntTSL 1 (best)22.06■■□□□ 1.123e-7■■■□□ 18.2
LSM11P83369 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.98■■□□□ 1.113e-7■■■□□ 18.2
LSM11P83369 D2HGDH-212ENST00000468064 2298 ntTSL 1 (best)21.39■■□□□ 1.013e-7■■■□□ 18.2
LSM11P83369 D2HGDH-202ENST00000400769 2277 ntTSL 221.39■■□□□ 1.013e-7■■■□□ 18.2
LSM11P83369 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.773e-7■■■□□ 18.2
LSM11P83369 D2HGDH-206ENST00000436747 4549 ntTSL 1 (best)15.73■□□□□ 0.113e-7■■■□□ 18.2
LSM11P83369 SLC12A4-209ENST00000572037 3620 ntTSL 2 BASIC11.05□□□□□ -0.642e-6■■■□□ 18.1
LSM11P83369 PSME2-206ENST00000559042 643 nt12.34□□□□□ -0.433e-10■■■□□ 18.1
LSM11P83369 SRRT-212ENST00000487311 563 ntTSL 214.17□□□□□ -0.142e-6■■■□□ 18.1
LSM11P83369 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.28□□□□□ -0.282e-6■■■□□ 18.1
LSM11P83369 PNPLA6-215ENST00000597202 658 ntTSL 212.67□□□□□ -0.382e-6■■■□□ 18.1
LSM11P83369 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.392e-6■■■□□ 18.1
LSM11P83369 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.582e-6■■■□□ 18.1
LSM11P83369 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC11.41□□□□□ -0.582e-6■■■□□ 18.1
LSM11P83369 PNPLA6-218ENST00000599947 669 ntTSL 29.92□□□□□ -0.822e-6■■■□□ 18.1
LSM11P83369 GANAB-216ENST00000540933 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.715e-22■■■□□ 18.1
LSM11P83369 GANAB-201ENST00000346178 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.95e-22■■■□□ 18.1
LSM11P83369 GANAB-211ENST00000532402 3718 ntTSL 1 (best)8.91□□□□□ -0.985e-22■■■□□ 18.1
LSM11P83369 FANCA-232ENST00000568983 726 ntTSL 210.62□□□□□ -0.717e-7■■■□□ 18.1
LSM11P83369 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.114e-17■■■□□ 18.1
LSM11P83369 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC11.71□□□□□ -0.534e-17■■■□□ 18.1
LSM11P83369 RCL1-209ENST00000473230 441 ntTSL 310.79□□□□□ -0.684e-17■■■□□ 18.1
LSM11P83369 RCL1-202ENST00000381730 801 ntTSL 3 BASIC10.03□□□□□ -0.84e-17■■■□□ 18.1
LSM11P83369 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.5■□□□□ 0.711e-7■■■□□ 18.1
LSM11P83369 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.231e-7■■■□□ 18.1
LSM11P83369 STAG3L5P-PVRIG2P-PILRB-202ENST00000444874 2661 ntTSL 213.5□□□□□ -0.251e-7■■■□□ 18.1
LSM11P83369 STAG3L5P-PVRIG2P-PILRB-201ENST00000310771 3634 ntTSL 2 BASIC10.41□□□□□ -0.741e-7■■■□□ 18.1
LSM11P83369 DDX11-201ENST00000228264 3717 ntTSL 1 (best) BASIC10.1□□□□□ -0.791e-6■■■□□ 18
LSM11P83369 DDX11-213ENST00000539049 3471 ntTSL 510.01□□□□□ -0.811e-6■■■□□ 18
LSM11P83369 DDX11-204ENST00000435753 4182 ntTSL 59.54□□□□□ -0.881e-6■■■□□ 18
LSM11P83369 DDX11-202ENST00000350437 3724 ntTSL 1 (best) BASIC9.34□□□□□ -0.911e-6■■■□□ 18
LSM11P83369 DDX11-229ENST00000545668 3751 ntTSL 1 (best) BASIC9.14□□□□□ -0.951e-6■■■□□ 18
LSM11P83369 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.032e-7■■■□□ 18
LSM11P83369 HPN-207ENST00000599363 1828 ntTSL 520.02■□□□□ 0.794e-25■■■□□ 18
LSM11P83369 HPN-204ENST00000593305 2175 ntTSL 218.6■□□□□ 0.574e-25■■■□□ 18
LSM11P83369 HPN-203ENST00000541345 1820 ntTSL 216.31■□□□□ 0.24e-25■■■□□ 18
LSM11P83369 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.134e-25■■■□□ 18
LSM11P83369 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.044e-25■■■□□ 18
LSM11P83369 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.56□□□□□ -0.44e-25■■■□□ 18
LSM11P83369 CBFA2T3-204ENST00000563640 664 ntTSL 213.54□□□□□ -0.249e-7■■■□□ 18
LSM11P83369 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.349e-7■■■□□ 18
LSM11P83369 PLD2-214ENST00000576864 726 ntTSL 313.69□□□□□ -0.221e-6■■■□□ 18
LSM11P83369 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.231e-6■■■□□ 18
LSM11P83369 PLD2-205ENST00000572940 3391 ntTSL 1 (best) BASIC9.77□□□□□ -0.851e-6■■■□□ 18
LSM11P83369 HNRNPDL-203ENST00000502762 2356 ntTSL 1 (best)19.49■□□□□ 0.717e-15■■■□□ 18
LSM11P83369 HNRNPDL-209ENST00000630114 1433 ntTSL 518.06■□□□□ 0.487e-15■■■□□ 18
LSM11P83369 HNRNPDL-202ENST00000349655 1402 ntTSL 1 (best)15.54■□□□□ 0.087e-15■■■□□ 18
LSM11P83369 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.027e-15■■■□□ 18
LSM11P83369 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.17e-15■■■□□ 18
LSM11P83369 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.167e-15■■■□□ 18
LSM11P83369 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.91□□□□□ -0.347e-15■■■□□ 18
LSM11P83369 HNRNPDL-201ENST00000295470 3781 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.737e-15■■■□□ 18
Retrieved 100 of 11,495 protein–RNA pairs in 54.8 ms