Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GFRA1P56159 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GFRA1P56159 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.31■□□□□ 0.68
GFRA1P56159 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.31■□□□□ 0.68
GFRA1P56159 KRT87P-202ENST00000534226 1464 ntBASIC19.31■□□□□ 0.68
GFRA1P56159 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GFRA1P56159 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
GFRA1P56159 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.31■□□□□ 0.68
GFRA1P56159 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.31■□□□□ 0.68
GFRA1P56159 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.31■□□□□ 0.68
GFRA1P56159 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
GFRA1P56159 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.31■□□□□ 0.68
GFRA1P56159 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
GFRA1P56159 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.31■□□□□ 0.68
GFRA1P56159 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
GFRA1P56159 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
GFRA1P56159 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.3■□□□□ 0.68
GFRA1P56159 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
GFRA1P56159 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GFRA1P56159 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GFRA1P56159 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GFRA1P56159 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.3■□□□□ 0.68
GFRA1P56159 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.3■□□□□ 0.68
GFRA1P56159 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
GFRA1P56159 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GFRA1P56159 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GFRA1P56159 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GFRA1P56159 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.3■□□□□ 0.68
GFRA1P56159 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GFRA1P56159 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.3■□□□□ 0.68
GFRA1P56159 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.3■□□□□ 0.68
GFRA1P56159 IKBKGP1-201ENST00000612193 1073 ntBASIC19.3■□□□□ 0.68
GFRA1P56159 AC092437.1-201ENST00000624794 1048 ntBASIC19.3■□□□□ 0.68
GFRA1P56159 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.3■□□□□ 0.68
GFRA1P56159 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GFRA1P56159 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.3■□□□□ 0.68
GFRA1P56159 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.3■□□□□ 0.68
GFRA1P56159 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GFRA1P56159 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
GFRA1P56159 AC068473.5-201ENST00000616428 2072 ntBASIC19.29■□□□□ 0.68
GFRA1P56159 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GFRA1P56159 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.29■□□□□ 0.68
GFRA1P56159 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.29■□□□□ 0.68
GFRA1P56159 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GFRA1P56159 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GFRA1P56159 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GFRA1P56159 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
GFRA1P56159 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.29■□□□□ 0.68
GFRA1P56159 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GFRA1P56159 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.29■□□□□ 0.68
GFRA1P56159 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.29■□□□□ 0.68
GFRA1P56159 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.29■□□□□ 0.68
GFRA1P56159 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.29■□□□□ 0.68
GFRA1P56159 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GFRA1P56159 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.29■□□□□ 0.68
GFRA1P56159 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.28■□□□□ 0.68
GFRA1P56159 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GFRA1P56159 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GFRA1P56159 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
GFRA1P56159 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.28■□□□□ 0.68
GFRA1P56159 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.28■□□□□ 0.68
GFRA1P56159 KRT19P1-201ENST00000405746 1186 ntBASIC19.28■□□□□ 0.68
GFRA1P56159 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
GFRA1P56159 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.28■□□□□ 0.68
GFRA1P56159 AC092053.2-201ENST00000640557 1818 ntBASIC19.28■□□□□ 0.68
GFRA1P56159 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GFRA1P56159 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GFRA1P56159 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GFRA1P56159 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.27■□□□□ 0.68
GFRA1P56159 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.27■□□□□ 0.68
GFRA1P56159 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.27■□□□□ 0.68
GFRA1P56159 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.27■□□□□ 0.68
GFRA1P56159 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.27■□□□□ 0.68
GFRA1P56159 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.27■□□□□ 0.68
GFRA1P56159 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.27■□□□□ 0.68
GFRA1P56159 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.27■□□□□ 0.68
GFRA1P56159 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GFRA1P56159 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GFRA1P56159 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
GFRA1P56159 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GFRA1P56159 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
GFRA1P56159 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GFRA1P56159 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GFRA1P56159 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.26■□□□□ 0.67
GFRA1P56159 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GFRA1P56159 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GFRA1P56159 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GFRA1P56159 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.26■□□□□ 0.67
GFRA1P56159 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
GFRA1P56159 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GFRA1P56159 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GFRA1P56159 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.25■□□□□ 0.67
GFRA1P56159 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GFRA1P56159 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GFRA1P56159 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
GFRA1P56159 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GFRA1P56159 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.25■□□□□ 0.67
GFRA1P56159 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.25■□□□□ 0.67
GFRA1P56159 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.25■□□□□ 0.67
GFRA1P56159 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms