Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXG1P55316 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXG1P55316 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXG1P55316 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXG1P55316 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXG1P55316 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXG1P55316 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
FOXG1P55316 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXG1P55316 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.88■□□□□ 0.61
FOXG1P55316 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.88■□□□□ 0.61
FOXG1P55316 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXG1P55316 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXG1P55316 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXG1P55316 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
FOXG1P55316 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXG1P55316 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.88■□□□□ 0.61
FOXG1P55316 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.88■□□□□ 0.61
FOXG1P55316 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXG1P55316 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXG1P55316 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.88■□□□□ 0.61
FOXG1P55316 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXG1P55316 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXG1P55316 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXG1P55316 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXG1P55316 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXG1P55316 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXG1P55316 AC026471.6-201ENST00000622954 1905 ntBASIC18.88■□□□□ 0.61
FOXG1P55316 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXG1P55316 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXG1P55316 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXG1P55316 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
FOXG1P55316 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXG1P55316 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXG1P55316 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXG1P55316 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXG1P55316 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXG1P55316 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXG1P55316 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.87■□□□□ 0.61
FOXG1P55316 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXG1P55316 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXG1P55316 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXG1P55316 AC242852.2-201ENST00000615738 1807 ntBASIC18.87■□□□□ 0.61
FOXG1P55316 AC055733.4-201ENST00000638462 1354 ntBASIC18.87■□□□□ 0.61
FOXG1P55316 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXG1P55316 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXG1P55316 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXG1P55316 AC092053.2-201ENST00000640557 1818 ntBASIC18.86■□□□□ 0.61
FOXG1P55316 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXG1P55316 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXG1P55316 AC009237.3-201ENST00000393279 1427 ntBASIC18.86■□□□□ 0.61
FOXG1P55316 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXG1P55316 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXG1P55316 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXG1P55316 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXG1P55316 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXG1P55316 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXG1P55316 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
FOXG1P55316 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXG1P55316 KRT18P5-201ENST00000436075 1291 ntBASIC18.86■□□□□ 0.61
FOXG1P55316 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXG1P55316 EP400NL-214ENST00000641289 2402 ntBASIC18.86■□□□□ 0.61
FOXG1P55316 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXG1P55316 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXG1P55316 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
FOXG1P55316 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXG1P55316 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXG1P55316 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXG1P55316 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.85■□□□□ 0.61
FOXG1P55316 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
FOXG1P55316 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
FOXG1P55316 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
FOXG1P55316 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
FOXG1P55316 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXG1P55316 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.85■□□□□ 0.61
FOXG1P55316 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXG1P55316 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXG1P55316 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
FOXG1P55316 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXG1P55316 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXG1P55316 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.85■□□□□ 0.61
FOXG1P55316 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.85■□□□□ 0.61
FOXG1P55316 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.85■□□□□ 0.61
FOXG1P55316 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.85■□□□□ 0.61
FOXG1P55316 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXG1P55316 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.85■□□□□ 0.61
FOXG1P55316 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXG1P55316 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FOXG1P55316 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FOXG1P55316 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXG1P55316 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.84■□□□□ 0.61
FOXG1P55316 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXG1P55316 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.84■□□□□ 0.61
FOXG1P55316 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.84■□□□□ 0.61
FOXG1P55316 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
FOXG1P55316 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FOXG1P55316 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
FOXG1P55316 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.84■□□□□ 0.61
FOXG1P55316 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.84■□□□□ 0.61
FOXG1P55316 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXG1P55316 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms