Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC087742.1-201ENST00000575880 1738 ntBASIC20.22■□□□□ 0.83
NR1H2P55055 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.21■□□□□ 0.83
NR1H2P55055 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NR1H2P55055 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NR1H2P55055 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NR1H2P55055 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.21■□□□□ 0.83
NR1H2P55055 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NR1H2P55055 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NR1H2P55055 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.21■□□□□ 0.83
NR1H2P55055 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.21■□□□□ 0.83
NR1H2P55055 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NR1H2P55055 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.21■□□□□ 0.83
NR1H2P55055 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NR1H2P55055 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NR1H2P55055 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NR1H2P55055 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NR1H2P55055 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NR1H2P55055 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NR1H2P55055 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NR1H2P55055 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NR1H2P55055 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NR1H2P55055 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NR1H2P55055 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NR1H2P55055 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NR1H2P55055 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.2■□□□□ 0.82
NR1H2P55055 AL136116.3-201ENST00000402907 1138 ntBASIC20.2■□□□□ 0.82
NR1H2P55055 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.2■□□□□ 0.82
NR1H2P55055 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.2■□□□□ 0.82
NR1H2P55055 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NR1H2P55055 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.2■□□□□ 0.82
NR1H2P55055 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NR1H2P55055 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.2■□□□□ 0.82
NR1H2P55055 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H2P55055 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.19■□□□□ 0.82
NR1H2P55055 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NR1H2P55055 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H2P55055 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.19■□□□□ 0.82
NR1H2P55055 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H2P55055 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NR1H2P55055 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H2P55055 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NR1H2P55055 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H2P55055 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H2P55055 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NR1H2P55055 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.19■□□□□ 0.82
NR1H2P55055 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H2P55055 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.19■□□□□ 0.82
NR1H2P55055 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H2P55055 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H2P55055 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H2P55055 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NR1H2P55055 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.18■□□□□ 0.82
NR1H2P55055 AF106564.1-201ENST00000607058 2553 ntBASIC20.18■□□□□ 0.82
NR1H2P55055 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NR1H2P55055 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NR1H2P55055 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
NR1H2P55055 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.18■□□□□ 0.82
NR1H2P55055 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.18■□□□□ 0.82
NR1H2P55055 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NR1H2P55055 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.18■□□□□ 0.82
NR1H2P55055 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NR1H2P55055 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.18■□□□□ 0.82
NR1H2P55055 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.18■□□□□ 0.82
NR1H2P55055 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NR1H2P55055 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.18■□□□□ 0.82
NR1H2P55055 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H2P55055 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.17■□□□□ 0.82
NR1H2P55055 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
NR1H2P55055 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.17■□□□□ 0.82
NR1H2P55055 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.17■□□□□ 0.82
NR1H2P55055 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H2P55055 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H2P55055 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
NR1H2P55055 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.17■□□□□ 0.82
NR1H2P55055 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H2P55055 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H2P55055 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H2P55055 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.17■□□□□ 0.82
NR1H2P55055 MIR6722-201ENST00000617286 78 ntBASIC20.17■□□□□ 0.82
NR1H2P55055 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.17■□□□□ 0.82
NR1H2P55055 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H2P55055 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H2P55055 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.17■□□□□ 0.82
NR1H2P55055 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H2P55055 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H2P55055 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H2P55055 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H2P55055 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.16■□□□□ 0.82
NR1H2P55055 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NR1H2P55055 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NR1H2P55055 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.16■□□□□ 0.82
NR1H2P55055 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NR1H2P55055 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NR1H2P55055 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.16■□□□□ 0.82
NR1H2P55055 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NR1H2P55055 AL139246.5-201ENST00000606645 996 ntBASIC20.16■□□□□ 0.82
NR1H2P55055 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.16■□□□□ 0.82
NR1H2P55055 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NR1H2P55055 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NR1H2P55055 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms