Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NEK4P51957 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
NEK4P51957 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
NEK4P51957 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.56■■□□□ 1.68
NEK4P51957 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
NEK4P51957 AC010141.3-201ENST00000456659 717 ntBASIC25.56■■□□□ 1.68
NEK4P51957 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
NEK4P51957 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.56■■□□□ 1.68
NEK4P51957 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NEK4P51957 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NEK4P51957 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
NEK4P51957 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
NEK4P51957 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NEK4P51957 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NEK4P51957 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.55■■□□□ 1.68
NEK4P51957 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NEK4P51957 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
NEK4P51957 SERBP1P1-201ENST00000396021 1160 ntBASIC25.55■■□□□ 1.68
NEK4P51957 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NEK4P51957 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
NEK4P51957 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NEK4P51957 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.55■■□□□ 1.68
NEK4P51957 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.55■■□□□ 1.68
NEK4P51957 AC087239.1-201ENST00000622671 572 ntBASIC25.55■■□□□ 1.68
NEK4P51957 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.55■■□□□ 1.68
NEK4P51957 AF106564.1-201ENST00000607058 2553 ntBASIC25.55■■□□□ 1.68
NEK4P51957 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NEK4P51957 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
NEK4P51957 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NEK4P51957 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
NEK4P51957 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
NEK4P51957 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NEK4P51957 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.54■■□□□ 1.68
NEK4P51957 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NEK4P51957 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.54■■□□□ 1.68
NEK4P51957 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.54■■□□□ 1.68
NEK4P51957 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.54■■□□□ 1.68
NEK4P51957 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NEK4P51957 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC25.54■■□□□ 1.68
NEK4P51957 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC25.53■■□□□ 1.68
NEK4P51957 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC25.53■■□□□ 1.68
NEK4P51957 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NEK4P51957 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
NEK4P51957 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NEK4P51957 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC25.53■■□□□ 1.68
NEK4P51957 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC25.53■■□□□ 1.68
NEK4P51957 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NEK4P51957 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NEK4P51957 SYT6-210ENST00000641643 1587 ntBASIC25.52■■□□□ 1.68
NEK4P51957 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NEK4P51957 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.52■■□□□ 1.68
NEK4P51957 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC25.52■■□□□ 1.68
NEK4P51957 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NEK4P51957 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
NEK4P51957 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC25.52■■□□□ 1.68
NEK4P51957 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.52■■□□□ 1.68
NEK4P51957 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.52■■□□□ 1.68
NEK4P51957 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
NEK4P51957 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC25.52■■□□□ 1.68
NEK4P51957 OXCT2P1-201ENST00000447263 1535 ntBASIC25.52■■□□□ 1.68
NEK4P51957 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.52■■□□□ 1.68
NEK4P51957 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NEK4P51957 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
NEK4P51957 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NEK4P51957 FEM1AP4-201ENST00000443167 1987 ntBASIC25.51■■□□□ 1.67
NEK4P51957 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC25.51■■□□□ 1.67
NEK4P51957 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.51■■□□□ 1.67
NEK4P51957 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.51■■□□□ 1.67
NEK4P51957 AL024507.2-201ENST00000606070 2574 ntBASIC25.51■■□□□ 1.67
NEK4P51957 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NEK4P51957 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC25.51■■□□□ 1.67
NEK4P51957 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
NEK4P51957 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NEK4P51957 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NEK4P51957 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
NEK4P51957 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NEK4P51957 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
NEK4P51957 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
NEK4P51957 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
NEK4P51957 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
NEK4P51957 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC25.5■■□□□ 1.67
NEK4P51957 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC25.5■■□□□ 1.67
NEK4P51957 AL138724.1-201ENST00000606771 1088 ntBASIC25.5■■□□□ 1.67
NEK4P51957 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
NEK4P51957 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
NEK4P51957 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NEK4P51957 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NEK4P51957 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC25.49■■□□□ 1.67
NEK4P51957 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
NEK4P51957 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC25.49■■□□□ 1.67
NEK4P51957 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.49■■□□□ 1.67
NEK4P51957 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
NEK4P51957 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
NEK4P51957 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.49■■□□□ 1.67
NEK4P51957 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NEK4P51957 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
NEK4P51957 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
NEK4P51957 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
NEK4P51957 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC25.49■■□□□ 1.67
NEK4P51957 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms