Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDK7P50613 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDK7P50613 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDK7P50613 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CDK7P50613 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.85■■□□□ 1.41
CDK7P50613 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.85■■□□□ 1.41
CDK7P50613 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.85■■□□□ 1.41
CDK7P50613 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.85■■□□□ 1.41
CDK7P50613 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.85■■□□□ 1.41
CDK7P50613 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDK7P50613 AC068338.2-201ENST00000563278 1430 ntBASIC23.84■■□□□ 1.41
CDK7P50613 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.84■■□□□ 1.41
CDK7P50613 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDK7P50613 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDK7P50613 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDK7P50613 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.84■■□□□ 1.41
CDK7P50613 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.84■■□□□ 1.41
CDK7P50613 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.84■■□□□ 1.41
CDK7P50613 MIPEPP3-201ENST00000412105 444 ntBASIC23.84■■□□□ 1.41
CDK7P50613 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.84■■□□□ 1.41
CDK7P50613 TERF1P5-201ENST00000477545 1207 ntBASIC23.84■■□□□ 1.41
CDK7P50613 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.84■■□□□ 1.41
CDK7P50613 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDK7P50613 AC013268.1-206ENST00000638368 961 ntBASIC23.84■■□□□ 1.41
CDK7P50613 AC112229.1-201ENST00000639295 961 ntBASIC23.84■■□□□ 1.41
CDK7P50613 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDK7P50613 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
CDK7P50613 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDK7P50613 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.83■■□□□ 1.41
CDK7P50613 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.83■■□□□ 1.41
CDK7P50613 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.83■■□□□ 1.41
CDK7P50613 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.83■■□□□ 1.4
CDK7P50613 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CDK7P50613 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDK7P50613 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDK7P50613 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDK7P50613 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDK7P50613 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CDK7P50613 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.82■■□□□ 1.4
CDK7P50613 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.82■■□□□ 1.4
CDK7P50613 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDK7P50613 AC079089.2-201ENST00000531211 1277 ntBASIC23.82■■□□□ 1.4
CDK7P50613 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDK7P50613 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.81■■□□□ 1.4
CDK7P50613 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDK7P50613 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.81■■□□□ 1.4
CDK7P50613 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CDK7P50613 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CDK7P50613 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDK7P50613 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDK7P50613 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
CDK7P50613 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDK7P50613 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.81■■□□□ 1.4
CDK7P50613 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.81■■□□□ 1.4
CDK7P50613 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDK7P50613 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.81■■□□□ 1.4
CDK7P50613 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.81■■□□□ 1.4
CDK7P50613 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDK7P50613 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.81■■□□□ 1.4
CDK7P50613 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.81■■□□□ 1.4
CDK7P50613 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.81■■□□□ 1.4
CDK7P50613 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDK7P50613 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDK7P50613 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDK7P50613 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDK7P50613 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDK7P50613 PRORSD1P-201ENST00000295112 541 ntBASIC23.8■■□□□ 1.4
CDK7P50613 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.8■■□□□ 1.4
CDK7P50613 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CDK7P50613 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.8■■□□□ 1.4
CDK7P50613 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.8■■□□□ 1.4
CDK7P50613 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.8■■□□□ 1.4
CDK7P50613 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.8■■□□□ 1.4
CDK7P50613 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CDK7P50613 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDK7P50613 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.79■■□□□ 1.4
CDK7P50613 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDK7P50613 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDK7P50613 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDK7P50613 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.79■■□□□ 1.4
CDK7P50613 KRT18P29-201ENST00000397031 1267 ntBASIC23.79■■□□□ 1.4
CDK7P50613 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDK7P50613 AC007322.4-201ENST00000509611 723 ntBASIC23.79■■□□□ 1.4
CDK7P50613 RNA5SP413-201ENST00000516373 109 ntBASIC23.79■■□□□ 1.4
CDK7P50613 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.79■■□□□ 1.4
CDK7P50613 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.79■■□□□ 1.4
CDK7P50613 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDK7P50613 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDK7P50613 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDK7P50613 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CDK7P50613 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.78■■□□□ 1.4
CDK7P50613 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDK7P50613 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDK7P50613 CYP2T1P-201ENST00000432607 1285 ntBASIC23.78■■□□□ 1.4
CDK7P50613 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.78■■□□□ 1.4
CDK7P50613 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDK7P50613 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.78■■□□□ 1.4
CDK7P50613 MKRN4P-201ENST00000444706 1521 ntBASIC23.78■■□□□ 1.4
CDK7P50613 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CDK7P50613 ABCB10P4-201ENST00000566803 2184 ntBASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms