Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNCAP37840 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SNCAP37840 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNCAP37840 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNCAP37840 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNCAP37840 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.58■□□□□ 0.4
SNCAP37840 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNCAP37840 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.58■□□□□ 0.4
SNCAP37840 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.58■□□□□ 0.4
SNCAP37840 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNCAP37840 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNCAP37840 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNCAP37840 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
SNCAP37840 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SNCAP37840 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.58■□□□□ 0.4
SNCAP37840 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNCAP37840 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.58■□□□□ 0.4
SNCAP37840 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.57■□□□□ 0.4
SNCAP37840 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SNCAP37840 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
SNCAP37840 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.57■□□□□ 0.4
SNCAP37840 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SNCAP37840 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNCAP37840 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNCAP37840 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNCAP37840 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNCAP37840 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNCAP37840 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNCAP37840 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
SNCAP37840 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SNCAP37840 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNCAP37840 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNCAP37840 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SNCAP37840 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.56■□□□□ 0.4
SNCAP37840 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SNCAP37840 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.56■□□□□ 0.4
SNCAP37840 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNCAP37840 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNCAP37840 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNCAP37840 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.56■□□□□ 0.4
SNCAP37840 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNCAP37840 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNCAP37840 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNCAP37840 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNCAP37840 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
SNCAP37840 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNCAP37840 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.55■□□□□ 0.4
SNCAP37840 AC021242.3-201ENST00000607598 1377 ntBASIC17.55■□□□□ 0.4
SNCAP37840 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNCAP37840 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SNCAP37840 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SNCAP37840 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNCAP37840 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.55■□□□□ 0.4
SNCAP37840 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.55■□□□□ 0.4
SNCAP37840 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.55■□□□□ 0.4
SNCAP37840 AC009086.3-201ENST00000623486 1008 ntBASIC17.55■□□□□ 0.4
SNCAP37840 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNCAP37840 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.55■□□□□ 0.4
SNCAP37840 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SNCAP37840 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNCAP37840 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNCAP37840 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNCAP37840 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNCAP37840 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNCAP37840 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.55■□□□□ 0.4
SNCAP37840 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNCAP37840 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNCAP37840 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
SNCAP37840 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNCAP37840 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.54■□□□□ 0.4
SNCAP37840 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNCAP37840 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNCAP37840 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SNCAP37840 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNCAP37840 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.54■□□□□ 0.4
SNCAP37840 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNCAP37840 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.54■□□□□ 0.4
SNCAP37840 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNCAP37840 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNCAP37840 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.53■□□□□ 0.4
SNCAP37840 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNCAP37840 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
SNCAP37840 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNCAP37840 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNCAP37840 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
SNCAP37840 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNCAP37840 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.53■□□□□ 0.4
SNCAP37840 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SNCAP37840 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.53■□□□□ 0.4
SNCAP37840 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.53■□□□□ 0.4
SNCAP37840 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNCAP37840 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.53■□□□□ 0.4
SNCAP37840 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNCAP37840 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNCAP37840 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNCAP37840 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.52■□□□□ 0.4
SNCAP37840 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNCAP37840 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SNCAP37840 KRT125P-201ENST00000546827 989 ntBASIC17.52■□□□□ 0.4
SNCAP37840 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms