Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS4P35443 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS4P35443 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
THBS4P35443 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.86■□□□□ 0.61
THBS4P35443 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.86■□□□□ 0.61
THBS4P35443 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
THBS4P35443 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.86■□□□□ 0.61
THBS4P35443 AL024507.2-201ENST00000606070 2574 ntBASIC18.86■□□□□ 0.61
THBS4P35443 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS4P35443 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS4P35443 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS4P35443 MIR572-201ENST00000384983 95 ntBASIC18.86■□□□□ 0.61
THBS4P35443 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.86■□□□□ 0.61
THBS4P35443 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
THBS4P35443 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.86■□□□□ 0.61
THBS4P35443 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS4P35443 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS4P35443 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
THBS4P35443 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS4P35443 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS4P35443 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
THBS4P35443 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.85■□□□□ 0.61
THBS4P35443 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THBS4P35443 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
THBS4P35443 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THBS4P35443 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THBS4P35443 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.85■□□□□ 0.61
THBS4P35443 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
THBS4P35443 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.85■□□□□ 0.61
THBS4P35443 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.85■□□□□ 0.61
THBS4P35443 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
THBS4P35443 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
THBS4P35443 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS4P35443 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.84■□□□□ 0.61
THBS4P35443 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
THBS4P35443 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.84■□□□□ 0.61
THBS4P35443 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.84■□□□□ 0.61
THBS4P35443 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS4P35443 AC026271.2-201ENST00000428091 497 ntBASIC18.84■□□□□ 0.61
THBS4P35443 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.84■□□□□ 0.61
THBS4P35443 AC068587.7-201ENST00000641602 218 ntBASIC18.84■□□□□ 0.61
THBS4P35443 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
THBS4P35443 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS4P35443 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
THBS4P35443 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.84■□□□□ 0.61
THBS4P35443 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS4P35443 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.83■□□□□ 0.61
THBS4P35443 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
THBS4P35443 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
THBS4P35443 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.83■□□□□ 0.61
THBS4P35443 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
THBS4P35443 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
THBS4P35443 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
THBS4P35443 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
THBS4P35443 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
THBS4P35443 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
THBS4P35443 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
THBS4P35443 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
THBS4P35443 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
THBS4P35443 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.83■□□□□ 0.6
THBS4P35443 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
THBS4P35443 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
THBS4P35443 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.83■□□□□ 0.6
THBS4P35443 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
THBS4P35443 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.83■□□□□ 0.6
THBS4P35443 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.83■□□□□ 0.6
THBS4P35443 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.83■□□□□ 0.6
THBS4P35443 AL031602.1-201ENST00000633169 911 ntBASIC18.83■□□□□ 0.6
THBS4P35443 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
THBS4P35443 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
THBS4P35443 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.83■□□□□ 0.6
THBS4P35443 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
THBS4P35443 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
THBS4P35443 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.82■□□□□ 0.6
THBS4P35443 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.82■□□□□ 0.6
THBS4P35443 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
THBS4P35443 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
THBS4P35443 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
THBS4P35443 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
THBS4P35443 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.82■□□□□ 0.6
THBS4P35443 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
THBS4P35443 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
THBS4P35443 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
THBS4P35443 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
THBS4P35443 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
THBS4P35443 AC087239.1-201ENST00000622671 572 ntBASIC18.82■□□□□ 0.6
THBS4P35443 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
THBS4P35443 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.82■□□□□ 0.6
THBS4P35443 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.82■□□□□ 0.6
THBS4P35443 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
THBS4P35443 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
THBS4P35443 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.82■□□□□ 0.6
THBS4P35443 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
THBS4P35443 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
THBS4P35443 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THBS4P35443 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.81■□□□□ 0.6
THBS4P35443 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
THBS4P35443 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THBS4P35443 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THBS4P35443 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms