Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.48■□□□□ 0.71
GDF1P27539 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.48■□□□□ 0.71
GDF1P27539 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
GDF1P27539 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.48■□□□□ 0.71
GDF1P27539 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GDF1P27539 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
GDF1P27539 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
GDF1P27539 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GDF1P27539 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GDF1P27539 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GDF1P27539 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
GDF1P27539 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
GDF1P27539 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
GDF1P27539 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GDF1P27539 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.47■□□□□ 0.71
GDF1P27539 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.47■□□□□ 0.71
GDF1P27539 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GDF1P27539 KRT87P-202ENST00000534226 1464 ntBASIC19.47■□□□□ 0.71
GDF1P27539 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GDF1P27539 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
GDF1P27539 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.46■□□□□ 0.71
GDF1P27539 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GDF1P27539 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GDF1P27539 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GDF1P27539 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GDF1P27539 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.46■□□□□ 0.71
GDF1P27539 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.46■□□□□ 0.71
GDF1P27539 KRT19P1-201ENST00000405746 1186 ntBASIC19.46■□□□□ 0.71
GDF1P27539 AC016769.1-201ENST00000409132 1010 ntBASIC19.46■□□□□ 0.71
GDF1P27539 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.46■□□□□ 0.71
GDF1P27539 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GDF1P27539 AC137761.2-201ENST00000561729 223 ntBASIC19.46■□□□□ 0.71
GDF1P27539 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.46■□□□□ 0.71
GDF1P27539 AC145350.3-201ENST00000569033 163 ntBASIC19.46■□□□□ 0.71
GDF1P27539 KRT18P61-201ENST00000585825 1298 ntBASIC19.46■□□□□ 0.71
GDF1P27539 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GDF1P27539 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GDF1P27539 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GDF1P27539 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GDF1P27539 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GDF1P27539 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GDF1P27539 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GDF1P27539 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GDF1P27539 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GDF1P27539 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
GDF1P27539 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GDF1P27539 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GDF1P27539 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.45■□□□□ 0.7
GDF1P27539 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.45■□□□□ 0.7
GDF1P27539 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.45■□□□□ 0.7
GDF1P27539 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GDF1P27539 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.45■□□□□ 0.7
GDF1P27539 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.45■□□□□ 0.7
GDF1P27539 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GDF1P27539 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
GDF1P27539 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GDF1P27539 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GDF1P27539 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.45■□□□□ 0.7
GDF1P27539 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GDF1P27539 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GDF1P27539 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GDF1P27539 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDF1P27539 AC055733.4-201ENST00000638462 1354 ntBASIC19.44■□□□□ 0.7
GDF1P27539 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDF1P27539 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDF1P27539 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDF1P27539 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.44■□□□□ 0.7
GDF1P27539 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GDF1P27539 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.44■□□□□ 0.7
GDF1P27539 AC004911.1-201ENST00000416316 871 ntBASIC19.44■□□□□ 0.7
GDF1P27539 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.44■□□□□ 0.7
GDF1P27539 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.44■□□□□ 0.7
GDF1P27539 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
GDF1P27539 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.44■□□□□ 0.7
GDF1P27539 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
GDF1P27539 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.44■□□□□ 0.7
GDF1P27539 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDF1P27539 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GDF1P27539 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDF1P27539 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
GDF1P27539 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
GDF1P27539 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.43■□□□□ 0.7
GDF1P27539 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GDF1P27539 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GDF1P27539 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GDF1P27539 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GDF1P27539 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GDF1P27539 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.43■□□□□ 0.7
GDF1P27539 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GDF1P27539 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GDF1P27539 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.43■□□□□ 0.7
GDF1P27539 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.43■□□□□ 0.7
GDF1P27539 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.43■□□□□ 0.7
GDF1P27539 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.43■□□□□ 0.7
GDF1P27539 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.43■□□□□ 0.7
GDF1P27539 AC092437.1-201ENST00000624794 1048 ntBASIC19.43■□□□□ 0.7
GDF1P27539 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GDF1P27539 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GDF1P27539 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GDF1P27539 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms