Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.38■■□□□ 1.01
BCKDHBP21953 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.38■■□□□ 1.01
BCKDHBP21953 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BCKDHBP21953 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BCKDHBP21953 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
BCKDHBP21953 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BCKDHBP21953 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BCKDHBP21953 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
BCKDHBP21953 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BCKDHBP21953 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BCKDHBP21953 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
BCKDHBP21953 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.37■■□□□ 1.01
BCKDHBP21953 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.37■■□□□ 1.01
BCKDHBP21953 MIPEPP3-201ENST00000412105 444 ntBASIC21.37■■□□□ 1.01
BCKDHBP21953 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BCKDHBP21953 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
BCKDHBP21953 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BCKDHBP21953 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.37■■□□□ 1.01
BCKDHBP21953 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.37■■□□□ 1.01
BCKDHBP21953 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.37■■□□□ 1.01
BCKDHBP21953 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
BCKDHBP21953 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BCKDHBP21953 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
BCKDHBP21953 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.36■■□□□ 1.01
BCKDHBP21953 ITM2C-210ENST00000620962 501 ntBASIC21.36■■□□□ 1.01
BCKDHBP21953 LINC01960-201ENST00000563759 1884 ntBASIC21.36■■□□□ 1.01
BCKDHBP21953 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
BCKDHBP21953 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BCKDHBP21953 MKRN4P-201ENST00000444706 1521 ntBASIC21.35■■□□□ 1.01
BCKDHBP21953 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BCKDHBP21953 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BCKDHBP21953 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.35■■□□□ 1.01
BCKDHBP21953 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.35■■□□□ 1.01
BCKDHBP21953 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
BCKDHBP21953 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.35■■□□□ 1.01
BCKDHBP21953 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.35■■□□□ 1.01
BCKDHBP21953 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.35■■□□□ 1.01
BCKDHBP21953 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
BCKDHBP21953 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BCKDHBP21953 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BCKDHBP21953 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BCKDHBP21953 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.35■■□□□ 1.01
BCKDHBP21953 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
BCKDHBP21953 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BCKDHBP21953 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.34■■□□□ 1.01
BCKDHBP21953 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
BCKDHBP21953 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BCKDHBP21953 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
BCKDHBP21953 KRT18P29-201ENST00000397031 1267 ntBASIC21.34■■□□□ 1.01
BCKDHBP21953 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.34■■□□□ 1.01
BCKDHBP21953 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.34■■□□□ 1.01
BCKDHBP21953 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.34■■□□□ 1.01
BCKDHBP21953 AC093787.1-201ENST00000450396 207 ntBASIC21.34■■□□□ 1.01
BCKDHBP21953 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.34■■□□□ 1.01
BCKDHBP21953 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.34■■□□□ 1.01
BCKDHBP21953 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.34■■□□□ 1.01
BCKDHBP21953 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BCKDHBP21953 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
BCKDHBP21953 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.34■■□□□ 1.01
BCKDHBP21953 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
BCKDHBP21953 ANOS2P-203ENST00000472227 1816 ntBASIC21.34■■□□□ 1.01
BCKDHBP21953 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.34■■□□□ 1.01
BCKDHBP21953 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.34■■□□□ 1.01
BCKDHBP21953 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BCKDHBP21953 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BCKDHBP21953 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BCKDHBP21953 PRORSD1P-201ENST00000295112 541 ntBASIC21.33■■□□□ 1.01
BCKDHBP21953 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
BCKDHBP21953 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BCKDHBP21953 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
BCKDHBP21953 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.33■■□□□ 1.01
BCKDHBP21953 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.33■■□□□ 1.01
BCKDHBP21953 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.33■■□□□ 1.01
BCKDHBP21953 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.33■■□□□ 1.01
BCKDHBP21953 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.33■■□□□ 1.01
BCKDHBP21953 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
BCKDHBP21953 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.33■■□□□ 1
BCKDHBP21953 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.33■■□□□ 1
BCKDHBP21953 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.32■■□□□ 1
BCKDHBP21953 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
BCKDHBP21953 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.32■■□□□ 1
BCKDHBP21953 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.32■■□□□ 1
BCKDHBP21953 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.32■■□□□ 1
BCKDHBP21953 EEF1DP3-203ENST00000566025 782 ntBASIC21.32■■□□□ 1
BCKDHBP21953 SLC7A5P1-201ENST00000568957 537 ntBASIC21.32■■□□□ 1
BCKDHBP21953 AC016405.3-201ENST00000607710 860 ntBASIC21.32■■□□□ 1
BCKDHBP21953 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.32■■□□□ 1
BCKDHBP21953 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.32■■□□□ 1
BCKDHBP21953 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.32■■□□□ 1
BCKDHBP21953 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BCKDHBP21953 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
BCKDHBP21953 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BCKDHBP21953 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.31■■□□□ 1
BCKDHBP21953 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.31■■□□□ 1
BCKDHBP21953 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BCKDHBP21953 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
BCKDHBP21953 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.31■■□□□ 1
BCKDHBP21953 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.31■■□□□ 1
BCKDHBP21953 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BCKDHBP21953 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms