Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATF1P18846 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATF1P18846 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATF1P18846 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATF1P18846 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ATF1P18846 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATF1P18846 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATF1P18846 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATF1P18846 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF1P18846 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF1P18846 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF1P18846 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.8■□□□□ 0.6
ATF1P18846 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF1P18846 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATF1P18846 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF1P18846 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ATF1P18846 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF1P18846 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ATF1P18846 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF1P18846 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF1P18846 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ATF1P18846 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.8■□□□□ 0.6
ATF1P18846 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.8■□□□□ 0.6
ATF1P18846 UNC93B8-201ENST00000511903 705 ntBASIC18.8■□□□□ 0.6
ATF1P18846 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.8■□□□□ 0.6
ATF1P18846 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF1P18846 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF1P18846 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF1P18846 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.8■□□□□ 0.6
ATF1P18846 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.79■□□□□ 0.6
ATF1P18846 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF1P18846 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.79■□□□□ 0.6
ATF1P18846 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF1P18846 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF1P18846 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF1P18846 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATF1P18846 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF1P18846 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.79■□□□□ 0.6
ATF1P18846 AL499627.2-201ENST00000606283 725 ntBASIC18.79■□□□□ 0.6
ATF1P18846 AL117332.1-201ENST00000622628 974 ntBASIC18.79■□□□□ 0.6
ATF1P18846 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.79■□□□□ 0.6
ATF1P18846 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF1P18846 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF1P18846 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF1P18846 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ATF1P18846 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATF1P18846 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.79■□□□□ 0.6
ATF1P18846 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATF1P18846 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ATF1P18846 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATF1P18846 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATF1P18846 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATF1P18846 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATF1P18846 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
ATF1P18846 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.78■□□□□ 0.6
ATF1P18846 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATF1P18846 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATF1P18846 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATF1P18846 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ATF1P18846 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATF1P18846 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATF1P18846 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ATF1P18846 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.77■□□□□ 0.6
ATF1P18846 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATF1P18846 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATF1P18846 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATF1P18846 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.77■□□□□ 0.6
ATF1P18846 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATF1P18846 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATF1P18846 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATF1P18846 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.77■□□□□ 0.6
ATF1P18846 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATF1P18846 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATF1P18846 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATF1P18846 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.77■□□□□ 0.59
ATF1P18846 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATF1P18846 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.76■□□□□ 0.59
ATF1P18846 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATF1P18846 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.76■□□□□ 0.59
ATF1P18846 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATF1P18846 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.76■□□□□ 0.59
ATF1P18846 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.76■□□□□ 0.59
ATF1P18846 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATF1P18846 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATF1P18846 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ATF1P18846 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATF1P18846 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ATF1P18846 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ATF1P18846 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.76■□□□□ 0.59
ATF1P18846 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATF1P18846 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATF1P18846 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.76■□□□□ 0.59
ATF1P18846 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATF1P18846 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
ATF1P18846 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.76■□□□□ 0.59
ATF1P18846 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
ATF1P18846 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATF1P18846 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
ATF1P18846 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATF1P18846 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms