Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.25■□□□□ 0.67
HIST1H1CP16403 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1CP16403 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1CP16403 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1CP16403 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1CP16403 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1CP16403 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1CP16403 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.25■□□□□ 0.67
HIST1H1CP16403 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1CP16403 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.25■□□□□ 0.67
HIST1H1CP16403 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1CP16403 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.25■□□□□ 0.67
HIST1H1CP16403 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1CP16403 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1CP16403 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HIST1H1CP16403 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1CP16403 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1CP16403 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1CP16403 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HIST1H1CP16403 AL356441.2-201ENST00000443009 864 ntBASIC19.24■□□□□ 0.67
HIST1H1CP16403 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HIST1H1CP16403 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1CP16403 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.24■□□□□ 0.67
HIST1H1CP16403 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1CP16403 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1CP16403 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1CP16403 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1CP16403 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.24■□□□□ 0.67
HIST1H1CP16403 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.24■□□□□ 0.67
HIST1H1CP16403 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.24■□□□□ 0.67
HIST1H1CP16403 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1CP16403 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1CP16403 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.24■□□□□ 0.67
HIST1H1CP16403 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
HIST1H1CP16403 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H1CP16403 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H1CP16403 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.23■□□□□ 0.67
HIST1H1CP16403 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.23■□□□□ 0.67
HIST1H1CP16403 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.23■□□□□ 0.67
HIST1H1CP16403 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.23■□□□□ 0.67
HIST1H1CP16403 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.23■□□□□ 0.67
HIST1H1CP16403 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.23■□□□□ 0.67
HIST1H1CP16403 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.23■□□□□ 0.67
HIST1H1CP16403 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H1CP16403 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.23■□□□□ 0.67
HIST1H1CP16403 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
HIST1H1CP16403 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H1CP16403 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H1CP16403 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HIST1H1CP16403 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.23■□□□□ 0.67
HIST1H1CP16403 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.22■□□□□ 0.67
HIST1H1CP16403 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H1CP16403 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H1CP16403 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.22■□□□□ 0.67
HIST1H1CP16403 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H1CP16403 SERBP1P1-201ENST00000396021 1160 ntBASIC19.22■□□□□ 0.67
HIST1H1CP16403 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.22■□□□□ 0.67
HIST1H1CP16403 MIR4466-201ENST00000606121 54 ntBASIC19.22■□□□□ 0.67
HIST1H1CP16403 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.22■□□□□ 0.67
HIST1H1CP16403 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H1CP16403 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.22■□□□□ 0.67
HIST1H1CP16403 SYT6-210ENST00000641643 1587 ntBASIC19.22■□□□□ 0.67
HIST1H1CP16403 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H1CP16403 AF106564.1-201ENST00000607058 2553 ntBASIC19.22■□□□□ 0.67
HIST1H1CP16403 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H1CP16403 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.22■□□□□ 0.67
HIST1H1CP16403 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H1CP16403 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H1CP16403 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H1CP16403 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HIST1H1CP16403 OXCT2P1-201ENST00000447263 1535 ntBASIC19.21■□□□□ 0.67
HIST1H1CP16403 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.21■□□□□ 0.67
HIST1H1CP16403 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H1CP16403 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.21■□□□□ 0.67
HIST1H1CP16403 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H1CP16403 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.21■□□□□ 0.67
HIST1H1CP16403 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.21■□□□□ 0.67
HIST1H1CP16403 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.21■□□□□ 0.67
HIST1H1CP16403 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.21■□□□□ 0.67
HIST1H1CP16403 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H1CP16403 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H1CP16403 FEM1AP4-201ENST00000443167 1987 ntBASIC19.21■□□□□ 0.67
HIST1H1CP16403 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H1CP16403 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.2■□□□□ 0.66
HIST1H1CP16403 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H1CP16403 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H1CP16403 AL024507.2-201ENST00000606070 2574 ntBASIC19.2■□□□□ 0.66
HIST1H1CP16403 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HIST1H1CP16403 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
HIST1H1CP16403 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H1CP16403 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.2■□□□□ 0.66
HIST1H1CP16403 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H1CP16403 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.2■□□□□ 0.66
HIST1H1CP16403 AC104564.3-201ENST00000582367 638 ntBASIC19.2■□□□□ 0.66
HIST1H1CP16403 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.2■□□□□ 0.66
HIST1H1CP16403 AL138724.1-201ENST00000606771 1088 ntBASIC19.2■□□□□ 0.66
HIST1H1CP16403 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.2■□□□□ 0.66
HIST1H1CP16403 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H1CP16403 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H1CP16403 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms