Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL11A1P12107 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL11A1P12107 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL11A1P12107 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
COL11A1P12107 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL11A1P12107 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
COL11A1P12107 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL11A1P12107 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
COL11A1P12107 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL11A1P12107 NAA20-201ENST00000310450 920 ntTSL 2 BASIC24.65■■□□□ 1.54
COL11A1P12107 CYP2T1P-201ENST00000432607 1285 ntBASIC24.65■■□□□ 1.54
COL11A1P12107 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC24.65■■□□□ 1.54
COL11A1P12107 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
COL11A1P12107 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL11A1P12107 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL11A1P12107 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.65■■□□□ 1.54
COL11A1P12107 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
COL11A1P12107 COMT-203ENST00000403184 2217 ntTSL 2 BASIC24.64■■□□□ 1.54
COL11A1P12107 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.64■■□□□ 1.54
COL11A1P12107 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.64■■□□□ 1.54
COL11A1P12107 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
COL11A1P12107 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.64■■□□□ 1.54
COL11A1P12107 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC24.64■■□□□ 1.54
COL11A1P12107 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC24.64■■□□□ 1.54
COL11A1P12107 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
COL11A1P12107 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
COL11A1P12107 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.64■■□□□ 1.53
COL11A1P12107 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.64■■□□□ 1.53
COL11A1P12107 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.64■■□□□ 1.53
COL11A1P12107 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
COL11A1P12107 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
COL11A1P12107 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL11A1P12107 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
COL11A1P12107 AC007322.1-201ENST00000426983 750 ntBASIC24.63■■□□□ 1.53
COL11A1P12107 AF201337.1-201ENST00000520239 748 ntBASIC24.63■■□□□ 1.53
COL11A1P12107 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.63■■□□□ 1.53
COL11A1P12107 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.63■■□□□ 1.53
COL11A1P12107 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
COL11A1P12107 AC010536.3-201ENST00000620306 533 ntBASIC24.63■■□□□ 1.53
COL11A1P12107 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.63■■□□□ 1.53
COL11A1P12107 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL11A1P12107 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL11A1P12107 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL11A1P12107 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL11A1P12107 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
COL11A1P12107 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.63■■□□□ 1.53
COL11A1P12107 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL11A1P12107 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
COL11A1P12107 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
COL11A1P12107 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
COL11A1P12107 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC24.63■■□□□ 1.53
COL11A1P12107 AL121832.2-201ENST00000610979 668 ntBASIC24.63■■□□□ 1.53
COL11A1P12107 AC013268.1-206ENST00000638368 961 ntBASIC24.63■■□□□ 1.53
COL11A1P12107 AC112229.1-201ENST00000639295 961 ntBASIC24.63■■□□□ 1.53
COL11A1P12107 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL11A1P12107 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
COL11A1P12107 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.62■■□□□ 1.53
COL11A1P12107 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.62■■□□□ 1.53
COL11A1P12107 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL11A1P12107 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL11A1P12107 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
COL11A1P12107 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
COL11A1P12107 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
COL11A1P12107 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC24.61■■□□□ 1.53
COL11A1P12107 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
COL11A1P12107 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC24.61■■□□□ 1.53
COL11A1P12107 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.61■■□□□ 1.53
COL11A1P12107 AC005181.1-201ENST00000604782 1256 ntBASIC24.61■■□□□ 1.53
COL11A1P12107 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL11A1P12107 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL11A1P12107 AC139530.1-201ENST00000575312 1977 ntBASIC24.61■■□□□ 1.53
COL11A1P12107 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.61■■□□□ 1.53
COL11A1P12107 AL138781.1-201ENST00000566567 1274 ntBASIC24.61■■□□□ 1.53
COL11A1P12107 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL11A1P12107 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
COL11A1P12107 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
COL11A1P12107 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL11A1P12107 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC24.6■■□□□ 1.53
COL11A1P12107 SLC29A4P1-201ENST00000398760 971 ntBASIC24.6■■□□□ 1.53
COL11A1P12107 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
COL11A1P12107 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.6■■□□□ 1.53
COL11A1P12107 AC137767.1-201ENST00000602918 1920 ntBASIC24.6■■□□□ 1.53
COL11A1P12107 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC24.6■■□□□ 1.53
COL11A1P12107 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL11A1P12107 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.59■■□□□ 1.53
COL11A1P12107 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL11A1P12107 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL11A1P12107 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
COL11A1P12107 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
COL11A1P12107 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.58■■□□□ 1.53
COL11A1P12107 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC24.58■■□□□ 1.53
COL11A1P12107 TSPY6P-201ENST00000448518 926 ntBASIC24.58■■□□□ 1.53
COL11A1P12107 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24.58■■□□□ 1.53
COL11A1P12107 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL11A1P12107 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC24.58■■□□□ 1.53
COL11A1P12107 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC24.58■■□□□ 1.53
COL11A1P12107 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL11A1P12107 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
COL11A1P12107 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
COL11A1P12107 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms