Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SMIM18P0DKX4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMIM18P0DKX4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.67■□□□□ 0.74
SMIM18P0DKX4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMIM18P0DKX4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMIM18P0DKX4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SMIM18P0DKX4 AC026202.3-201ENST00000600805 1127 ntBASIC19.67■□□□□ 0.74
SMIM18P0DKX4 CA15P2-201ENST00000611168 834 ntBASIC19.67■□□□□ 0.74
SMIM18P0DKX4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMIM18P0DKX4 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.67■□□□□ 0.74
SMIM18P0DKX4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.67■□□□□ 0.74
SMIM18P0DKX4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMIM18P0DKX4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SMIM18P0DKX4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMIM18P0DKX4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SMIM18P0DKX4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.66■□□□□ 0.74
SMIM18P0DKX4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMIM18P0DKX4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMIM18P0DKX4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.66■□□□□ 0.74
SMIM18P0DKX4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMIM18P0DKX4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMIM18P0DKX4 AL592295.1-201ENST00000400984 884 ntBASIC19.66■□□□□ 0.74
SMIM18P0DKX4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.66■□□□□ 0.74
SMIM18P0DKX4 RAP2CP1-202ENST00000605179 643 ntBASIC19.66■□□□□ 0.74
SMIM18P0DKX4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.66■□□□□ 0.74
SMIM18P0DKX4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMIM18P0DKX4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMIM18P0DKX4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMIM18P0DKX4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.66■□□□□ 0.74
SMIM18P0DKX4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMIM18P0DKX4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SMIM18P0DKX4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMIM18P0DKX4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMIM18P0DKX4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
SMIM18P0DKX4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMIM18P0DKX4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.65■□□□□ 0.74
SMIM18P0DKX4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMIM18P0DKX4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMIM18P0DKX4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SMIM18P0DKX4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.65■□□□□ 0.74
SMIM18P0DKX4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SMIM18P0DKX4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.65■□□□□ 0.74
SMIM18P0DKX4 AC092296.2-201ENST00000589470 999 ntBASIC19.65■□□□□ 0.74
SMIM18P0DKX4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMIM18P0DKX4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SMIM18P0DKX4 AL049796.1-201ENST00000565336 1766 ntBASIC19.65■□□□□ 0.74
SMIM18P0DKX4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMIM18P0DKX4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.64■□□□□ 0.74
SMIM18P0DKX4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.64■□□□□ 0.74
SMIM18P0DKX4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
SMIM18P0DKX4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SMIM18P0DKX4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.64■□□□□ 0.74
SMIM18P0DKX4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SMIM18P0DKX4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.64■□□□□ 0.73
SMIM18P0DKX4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMIM18P0DKX4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMIM18P0DKX4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMIM18P0DKX4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMIM18P0DKX4 AC026471.6-201ENST00000622954 1905 ntBASIC19.64■□□□□ 0.73
SMIM18P0DKX4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SMIM18P0DKX4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMIM18P0DKX4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMIM18P0DKX4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMIM18P0DKX4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.64■□□□□ 0.73
SMIM18P0DKX4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SMIM18P0DKX4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMIM18P0DKX4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SMIM18P0DKX4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.63■□□□□ 0.73
SMIM18P0DKX4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMIM18P0DKX4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SMIM18P0DKX4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SMIM18P0DKX4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.63■□□□□ 0.73
SMIM18P0DKX4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.63■□□□□ 0.73
SMIM18P0DKX4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SMIM18P0DKX4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.63■□□□□ 0.73
SMIM18P0DKX4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMIM18P0DKX4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 AC026471.1-201ENST00000564629 3026 ntBASIC19.62■□□□□ 0.73
SMIM18P0DKX4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
SMIM18P0DKX4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms