Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.57■■□□□ 1.36
TPM1P09493 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TPM1P09493 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TPM1P09493 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TPM1P09493 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TPM1P09493 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC23.56■■□□□ 1.36
TPM1P09493 Z98882.1-201ENST00000622160 2253 ntBASIC23.56■■□□□ 1.36
TPM1P09493 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TPM1P09493 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TPM1P09493 C17orf82-201ENST00000623772 1530 ntBASIC23.56■■□□□ 1.36
TPM1P09493 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
TPM1P09493 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TPM1P09493 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
TPM1P09493 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.56■■□□□ 1.36
TPM1P09493 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TPM1P09493 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TPM1P09493 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TPM1P09493 AC092667.1-201ENST00000434301 2586 ntBASIC23.56■■□□□ 1.36
TPM1P09493 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.56■■□□□ 1.36
TPM1P09493 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TPM1P09493 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TPM1P09493 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TPM1P09493 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
TPM1P09493 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
TPM1P09493 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.55■■□□□ 1.36
TPM1P09493 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TPM1P09493 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TPM1P09493 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TPM1P09493 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.55■■□□□ 1.36
TPM1P09493 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
TPM1P09493 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.55■■□□□ 1.36
TPM1P09493 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
TPM1P09493 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TPM1P09493 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TPM1P09493 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
TPM1P09493 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
TPM1P09493 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
TPM1P09493 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TPM1P09493 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.54■■□□□ 1.36
TPM1P09493 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.54■■□□□ 1.36
TPM1P09493 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.54■■□□□ 1.36
TPM1P09493 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.54■■□□□ 1.36
TPM1P09493 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
TPM1P09493 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
TPM1P09493 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.53■■□□□ 1.36
TPM1P09493 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TPM1P09493 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TPM1P09493 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TPM1P09493 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.53■■□□□ 1.36
TPM1P09493 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TPM1P09493 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.53■■□□□ 1.36
TPM1P09493 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TPM1P09493 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TPM1P09493 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TPM1P09493 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TPM1P09493 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
TPM1P09493 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TPM1P09493 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TPM1P09493 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.52■■□□□ 1.36
TPM1P09493 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TPM1P09493 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TPM1P09493 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TPM1P09493 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TPM1P09493 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TPM1P09493 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TPM1P09493 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TPM1P09493 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TPM1P09493 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
TPM1P09493 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.52■■□□□ 1.36
TPM1P09493 AL499627.2-201ENST00000606283 725 ntBASIC23.52■■□□□ 1.36
TPM1P09493 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TPM1P09493 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TPM1P09493 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
TPM1P09493 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.52■■□□□ 1.36
TPM1P09493 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TPM1P09493 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TPM1P09493 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TPM1P09493 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
TPM1P09493 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
TPM1P09493 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TPM1P09493 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TPM1P09493 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TPM1P09493 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.51■■□□□ 1.35
TPM1P09493 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
TPM1P09493 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.51■■□□□ 1.35
TPM1P09493 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TPM1P09493 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.51■■□□□ 1.35
TPM1P09493 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.51■■□□□ 1.35
TPM1P09493 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TPM1P09493 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TPM1P09493 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TPM1P09493 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TPM1P09493 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TPM1P09493 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TPM1P09493 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
TPM1P09493 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TPM1P09493 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TPM1P09493 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TPM1P09493 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TPM1P09493 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms