Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.14■□□□□ 0.97
RBP1P09455 OXCT2P1-201ENST00000447263 1535 ntBASIC21.14■□□□□ 0.97
RBP1P09455 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
RBP1P09455 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.13■□□□□ 0.97
RBP1P09455 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RBP1P09455 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RBP1P09455 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RBP1P09455 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RBP1P09455 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.13■□□□□ 0.97
RBP1P09455 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RBP1P09455 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.13■□□□□ 0.97
RBP1P09455 DUX4L19-201ENST00000557448 1267 ntBASIC21.13■□□□□ 0.97
RBP1P09455 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RBP1P09455 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.13■□□□□ 0.97
RBP1P09455 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RBP1P09455 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RBP1P09455 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RBP1P09455 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RBP1P09455 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RBP1P09455 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.13■□□□□ 0.97
RBP1P09455 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RBP1P09455 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBP1P09455 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBP1P09455 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBP1P09455 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RBP1P09455 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
RBP1P09455 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBP1P09455 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBP1P09455 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.12■□□□□ 0.97
RBP1P09455 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RBP1P09455 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RBP1P09455 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBP1P09455 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.12■□□□□ 0.97
RBP1P09455 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBP1P09455 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBP1P09455 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RBP1P09455 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBP1P09455 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.12■□□□□ 0.97
RBP1P09455 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.12■□□□□ 0.97
RBP1P09455 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.12■□□□□ 0.97
RBP1P09455 AC026471.6-201ENST00000622954 1905 ntBASIC21.12■□□□□ 0.97
RBP1P09455 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RBP1P09455 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RBP1P09455 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RBP1P09455 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.11■□□□□ 0.97
RBP1P09455 AC010525.1-201ENST00000585559 441 ntBASIC21.11■□□□□ 0.97
RBP1P09455 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RBP1P09455 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RBP1P09455 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
RBP1P09455 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBP1P09455 SYT6-210ENST00000641643 1587 ntBASIC21.1■□□□□ 0.97
RBP1P09455 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBP1P09455 AC005229.4-201ENST00000610085 2198 ntBASIC21.1■□□□□ 0.97
RBP1P09455 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBP1P09455 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBP1P09455 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBP1P09455 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.1■□□□□ 0.97
RBP1P09455 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.1■□□□□ 0.97
RBP1P09455 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBP1P09455 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RBP1P09455 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBP1P09455 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBP1P09455 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RBP1P09455 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RBP1P09455 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RBP1P09455 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RBP1P09455 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RBP1P09455 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RBP1P09455 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.09■□□□□ 0.97
RBP1P09455 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RBP1P09455 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.09■□□□□ 0.97
RBP1P09455 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RBP1P09455 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RBP1P09455 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.09■□□□□ 0.97
RBP1P09455 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.09■□□□□ 0.97
RBP1P09455 AL356441.2-201ENST00000443009 864 ntBASIC21.09■□□□□ 0.97
RBP1P09455 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.09■□□□□ 0.97
RBP1P09455 AL034346.1-201ENST00000568244 1277 ntBASIC21.09■□□□□ 0.97
RBP1P09455 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.09■□□□□ 0.97
RBP1P09455 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RBP1P09455 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RBP1P09455 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RBP1P09455 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RBP1P09455 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RBP1P09455 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RBP1P09455 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RBP1P09455 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RBP1P09455 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RBP1P09455 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RBP1P09455 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RBP1P09455 SERBP1P1-201ENST00000396021 1160 ntBASIC21.08■□□□□ 0.97
RBP1P09455 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
RBP1P09455 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.08■□□□□ 0.97
RBP1P09455 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.08■□□□□ 0.97
RBP1P09455 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
RBP1P09455 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RBP1P09455 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RBP1P09455 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RBP1P09455 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RBP1P09455 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms