Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL4A2P08572 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.92■■□□□ 1.1
COL4A2P08572 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL4A2P08572 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
COL4A2P08572 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL4A2P08572 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL4A2P08572 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
COL4A2P08572 LINC00526-201ENST00000581067 1875 ntBASIC21.92■■□□□ 1.1
COL4A2P08572 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL4A2P08572 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.92■■□□□ 1.1
COL4A2P08572 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.92■■□□□ 1.1
COL4A2P08572 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
COL4A2P08572 AC016405.3-201ENST00000607710 860 ntBASIC21.92■■□□□ 1.1
COL4A2P08572 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
COL4A2P08572 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
COL4A2P08572 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL4A2P08572 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL4A2P08572 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.91■■□□□ 1.1
COL4A2P08572 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.91■■□□□ 1.1
COL4A2P08572 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL4A2P08572 RNA5SP413-201ENST00000516373 109 ntBASIC21.91■■□□□ 1.1
COL4A2P08572 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.91■■□□□ 1.1
COL4A2P08572 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.91■■□□□ 1.1
COL4A2P08572 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
COL4A2P08572 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL4A2P08572 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL4A2P08572 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL4A2P08572 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.9■■□□□ 1.1
COL4A2P08572 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.9■■□□□ 1.1
COL4A2P08572 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL4A2P08572 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.9■■□□□ 1.1
COL4A2P08572 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.9■■□□□ 1.1
COL4A2P08572 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL4A2P08572 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL4A2P08572 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL4A2P08572 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.89■■□□□ 1.1
COL4A2P08572 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.89■■□□□ 1.1
COL4A2P08572 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
COL4A2P08572 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL4A2P08572 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL4A2P08572 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL4A2P08572 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.89■■□□□ 1.09
COL4A2P08572 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL4A2P08572 AC093787.1-201ENST00000450396 207 ntBASIC21.89■■□□□ 1.09
COL4A2P08572 RARRES2P4-201ENST00000514074 484 ntBASIC21.89■■□□□ 1.09
COL4A2P08572 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
COL4A2P08572 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.89■■□□□ 1.09
COL4A2P08572 MYC-209ENST00000641252 345 ntBASIC21.89■■□□□ 1.09
COL4A2P08572 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL4A2P08572 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL4A2P08572 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL4A2P08572 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL4A2P08572 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL4A2P08572 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.88■■□□□ 1.09
COL4A2P08572 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL4A2P08572 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL4A2P08572 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.88■■□□□ 1.09
COL4A2P08572 RPS2P52-201ENST00000469610 820 ntBASIC21.88■■□□□ 1.09
COL4A2P08572 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL4A2P08572 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL4A2P08572 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.87■■□□□ 1.09
COL4A2P08572 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.87■■□□□ 1.09
COL4A2P08572 FAM201B-201ENST00000458407 597 ntBASIC21.87■■□□□ 1.09
COL4A2P08572 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.87■■□□□ 1.09
COL4A2P08572 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.87■■□□□ 1.09
COL4A2P08572 OR7E47P-201ENST00000546390 1422 ntBASIC21.87■■□□□ 1.09
COL4A2P08572 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL4A2P08572 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
COL4A2P08572 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.86■■□□□ 1.09
COL4A2P08572 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL4A2P08572 MIPEPP3-201ENST00000412105 444 ntBASIC21.86■■□□□ 1.09
COL4A2P08572 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL4A2P08572 TERF1P5-201ENST00000477545 1207 ntBASIC21.86■■□□□ 1.09
COL4A2P08572 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.86■■□□□ 1.09
COL4A2P08572 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.86■■□□□ 1.09
COL4A2P08572 AC092118.2-201ENST00000613495 667 ntBASIC21.86■■□□□ 1.09
COL4A2P08572 OR10C1-204ENST00000622521 1039 ntBASIC21.86■■□□□ 1.09
COL4A2P08572 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL4A2P08572 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL4A2P08572 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL4A2P08572 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.86■■□□□ 1.09
COL4A2P08572 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL4A2P08572 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
COL4A2P08572 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
COL4A2P08572 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL4A2P08572 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.86■■□□□ 1.09
COL4A2P08572 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL4A2P08572 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
COL4A2P08572 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL4A2P08572 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL4A2P08572 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
COL4A2P08572 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL4A2P08572 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.85■■□□□ 1.09
COL4A2P08572 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.85■■□□□ 1.09
COL4A2P08572 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
COL4A2P08572 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
COL4A2P08572 AC053503.5-201ENST00000601508 636 ntBASIC21.85■■□□□ 1.09
COL4A2P08572 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL4A2P08572 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL4A2P08572 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms