Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
COL2A1P02458 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
COL2A1P02458 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC25.35■■□□□ 1.65
COL2A1P02458 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC25.34■■□□□ 1.65
COL2A1P02458 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL2A1P02458 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL2A1P02458 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC25.34■■□□□ 1.65
COL2A1P02458 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL2A1P02458 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.34■■□□□ 1.65
COL2A1P02458 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
COL2A1P02458 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL2A1P02458 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL2A1P02458 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC25.34■■□□□ 1.65
COL2A1P02458 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC25.34■■□□□ 1.65
COL2A1P02458 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL2A1P02458 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL2A1P02458 TSPY6P-201ENST00000448518 926 ntBASIC25.34■■□□□ 1.65
COL2A1P02458 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC25.34■■□□□ 1.65
COL2A1P02458 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC25.34■■□□□ 1.65
COL2A1P02458 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL2A1P02458 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
COL2A1P02458 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC25.33■■□□□ 1.65
COL2A1P02458 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.33■■□□□ 1.65
COL2A1P02458 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.33■■□□□ 1.65
COL2A1P02458 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
COL2A1P02458 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC25.33■■□□□ 1.65
COL2A1P02458 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.33■■□□□ 1.65
COL2A1P02458 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL2A1P02458 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL2A1P02458 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL2A1P02458 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL2A1P02458 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
COL2A1P02458 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL2A1P02458 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL2A1P02458 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
COL2A1P02458 NAA20-201ENST00000310450 920 ntTSL 2 BASIC25.32■■□□□ 1.64
COL2A1P02458 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL2A1P02458 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC25.32■■□□□ 1.64
COL2A1P02458 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL2A1P02458 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC25.32■■□□□ 1.64
COL2A1P02458 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC25.32■■□□□ 1.64
COL2A1P02458 AC007322.4-201ENST00000509611 723 ntBASIC25.32■■□□□ 1.64
COL2A1P02458 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL2A1P02458 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC25.32■■□□□ 1.64
COL2A1P02458 AC013268.1-206ENST00000638368 961 ntBASIC25.32■■□□□ 1.64
COL2A1P02458 AC112229.1-201ENST00000639295 961 ntBASIC25.32■■□□□ 1.64
COL2A1P02458 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL2A1P02458 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL2A1P02458 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL2A1P02458 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL2A1P02458 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC25.31■■□□□ 1.64
COL2A1P02458 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC25.31■■□□□ 1.64
COL2A1P02458 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC25.31■■□□□ 1.64
COL2A1P02458 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC25.31■■□□□ 1.64
COL2A1P02458 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
COL2A1P02458 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.31■■□□□ 1.64
COL2A1P02458 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC25.31■■□□□ 1.64
COL2A1P02458 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
COL2A1P02458 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC25.3■■□□□ 1.64
COL2A1P02458 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
COL2A1P02458 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL2A1P02458 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL2A1P02458 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC25.3■■□□□ 1.64
COL2A1P02458 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC25.3■■□□□ 1.64
COL2A1P02458 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC25.3■■□□□ 1.64
COL2A1P02458 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC25.3■■□□□ 1.64
COL2A1P02458 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL2A1P02458 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL2A1P02458 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL2A1P02458 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL2A1P02458 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL2A1P02458 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL2A1P02458 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC25.29■■□□□ 1.64
COL2A1P02458 AC133552.2-202ENST00000575694 574 ntBASIC25.29■■□□□ 1.64
COL2A1P02458 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC25.29■■□□□ 1.64
COL2A1P02458 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC25.29■■□□□ 1.64
COL2A1P02458 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC25.29■■□□□ 1.64
COL2A1P02458 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.29■■□□□ 1.64
COL2A1P02458 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL2A1P02458 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.29■■□□□ 1.64
COL2A1P02458 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC25.29■■□□□ 1.64
COL2A1P02458 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.29■■□□□ 1.64
COL2A1P02458 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL2A1P02458 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
COL2A1P02458 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL2A1P02458 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC25.28■■□□□ 1.64
COL2A1P02458 AC083906.2-201ENST00000511578 360 ntBASIC25.28■■□□□ 1.64
COL2A1P02458 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC25.28■■□□□ 1.64
COL2A1P02458 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC25.28■■□□□ 1.64
COL2A1P02458 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC25.27■■□□□ 1.64
COL2A1P02458 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL2A1P02458 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL2A1P02458 ABHD17AP1-201ENST00000358206 933 ntBASIC25.27■■□□□ 1.64
COL2A1P02458 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC25.27■■□□□ 1.64
COL2A1P02458 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
COL2A1P02458 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC25.27■■□□□ 1.64
COL2A1P02458 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC25.27■■□□□ 1.64
COL2A1P02458 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL2A1P02458 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
COL2A1P02458 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms