Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.76■□□□□ 0.27
TOMM40O96008 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOMM40O96008 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TOMM40O96008 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOMM40O96008 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.76■□□□□ 0.27
TOMM40O96008 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TOMM40O96008 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TOMM40O96008 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TOMM40O96008 AC073130.3-201ENST00000624389 2278 ntBASIC16.76■□□□□ 0.27
TOMM40O96008 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TOMM40O96008 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TOMM40O96008 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOMM40O96008 AC244015.2-201ENST00000616358 1861 ntBASIC16.76■□□□□ 0.27
TOMM40O96008 AC026310.3-201ENST00000625186 2373 ntBASIC16.75■□□□□ 0.27
TOMM40O96008 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.75■□□□□ 0.27
TOMM40O96008 AL391422.3-201ENST00000603791 2761 ntBASIC16.75■□□□□ 0.27
TOMM40O96008 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TOMM40O96008 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOMM40O96008 SRD5A1P1-201ENST00000442297 786 ntBASIC16.75■□□□□ 0.27
TOMM40O96008 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TOMM40O96008 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.75■□□□□ 0.27
TOMM40O96008 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOMM40O96008 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOMM40O96008 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOMM40O96008 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.75■□□□□ 0.27
TOMM40O96008 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOMM40O96008 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOMM40O96008 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOMM40O96008 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOMM40O96008 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.74■□□□□ 0.27
TOMM40O96008 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOMM40O96008 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOMM40O96008 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOMM40O96008 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOMM40O96008 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TOMM40O96008 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TOMM40O96008 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.74■□□□□ 0.27
TOMM40O96008 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TOMM40O96008 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TOMM40O96008 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.74■□□□□ 0.27
TOMM40O96008 OR2I1P-207ENST00000453522 948 ntBASIC16.74■□□□□ 0.27
TOMM40O96008 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TOMM40O96008 MIR3181-201ENST00000578512 73 ntBASIC16.74■□□□□ 0.27
TOMM40O96008 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.74■□□□□ 0.27
TOMM40O96008 AC087239.1-201ENST00000622671 572 ntBASIC16.74■□□□□ 0.27
TOMM40O96008 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOMM40O96008 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOMM40O96008 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOMM40O96008 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.74■□□□□ 0.27
TOMM40O96008 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOMM40O96008 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TOMM40O96008 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TOMM40O96008 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TOMM40O96008 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TOMM40O96008 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.73■□□□□ 0.27
TOMM40O96008 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TOMM40O96008 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.73■□□□□ 0.27
TOMM40O96008 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TOMM40O96008 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TOMM40O96008 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TOMM40O96008 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TOMM40O96008 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TOMM40O96008 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TOMM40O96008 OR7E47P-201ENST00000546390 1422 ntBASIC16.73■□□□□ 0.27
TOMM40O96008 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TOMM40O96008 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.73■□□□□ 0.27
TOMM40O96008 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TOMM40O96008 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.73■□□□□ 0.27
TOMM40O96008 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TOMM40O96008 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TOMM40O96008 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TOMM40O96008 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TOMM40O96008 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.73■□□□□ 0.27
TOMM40O96008 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TOMM40O96008 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TOMM40O96008 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TOMM40O96008 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TOMM40O96008 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TOMM40O96008 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TOMM40O96008 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.72■□□□□ 0.27
TOMM40O96008 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TOMM40O96008 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
TOMM40O96008 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.72■□□□□ 0.27
TOMM40O96008 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TOMM40O96008 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TOMM40O96008 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.72■□□□□ 0.27
TOMM40O96008 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TOMM40O96008 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.72■□□□□ 0.27
TOMM40O96008 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.72■□□□□ 0.27
TOMM40O96008 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TOMM40O96008 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TOMM40O96008 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.71■□□□□ 0.27
TOMM40O96008 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TOMM40O96008 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.71■□□□□ 0.27
TOMM40O96008 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TOMM40O96008 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TOMM40O96008 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TOMM40O96008 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TOMM40O96008 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.71■□□□□ 0.27
TOMM40O96008 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms