Protein–RNA interactions for Protein: O95801

TTC4, Tetratricopeptide repeat protein 4, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4O95801 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22■■□□□ 1.11
TTC4O95801 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TTC4O95801 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
TTC4O95801 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.99■■□□□ 1.11
TTC4O95801 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.99■■□□□ 1.11
TTC4O95801 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TTC4O95801 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
TTC4O95801 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TTC4O95801 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.99■■□□□ 1.11
TTC4O95801 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.99■■□□□ 1.11
TTC4O95801 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
TTC4O95801 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TTC4O95801 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TTC4O95801 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TTC4O95801 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TTC4O95801 KRT16P3-201ENST00000439127 1283 ntBASIC21.99■■□□□ 1.11
TTC4O95801 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.99■■□□□ 1.11
TTC4O95801 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.99■■□□□ 1.11
TTC4O95801 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TTC4O95801 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TTC4O95801 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TTC4O95801 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
TTC4O95801 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TTC4O95801 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TTC4O95801 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TTC4O95801 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
TTC4O95801 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TTC4O95801 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
TTC4O95801 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TTC4O95801 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
TTC4O95801 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
TTC4O95801 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TTC4O95801 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.98■■□□□ 1.11
TTC4O95801 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
TTC4O95801 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TTC4O95801 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.98■■□□□ 1.11
TTC4O95801 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TTC4O95801 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
TTC4O95801 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC4O95801 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC4O95801 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC4O95801 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
TTC4O95801 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TTC4O95801 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.97■■□□□ 1.11
TTC4O95801 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC4O95801 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.97■■□□□ 1.11
TTC4O95801 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC4O95801 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TTC4O95801 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TTC4O95801 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TTC4O95801 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
TTC4O95801 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TTC4O95801 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.96■■□□□ 1.11
TTC4O95801 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TTC4O95801 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TTC4O95801 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TTC4O95801 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TTC4O95801 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.96■■□□□ 1.11
TTC4O95801 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
TTC4O95801 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.96■■□□□ 1.11
TTC4O95801 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TTC4O95801 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TTC4O95801 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.96■■□□□ 1.11
TTC4O95801 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
TTC4O95801 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TTC4O95801 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TTC4O95801 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TTC4O95801 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TTC4O95801 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
TTC4O95801 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.95■■□□□ 1.1
TTC4O95801 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.95■■□□□ 1.1
TTC4O95801 AL035685.1-201ENST00000636663 812 ntBASIC21.95■■□□□ 1.1
TTC4O95801 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TTC4O95801 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.95■■□□□ 1.1
TTC4O95801 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TTC4O95801 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
TTC4O95801 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TTC4O95801 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.94■■□□□ 1.1
TTC4O95801 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TTC4O95801 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
TTC4O95801 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.94■■□□□ 1.1
TTC4O95801 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TTC4O95801 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TTC4O95801 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TTC4O95801 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TTC4O95801 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TTC4O95801 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TTC4O95801 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TTC4O95801 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TTC4O95801 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.94■■□□□ 1.1
TTC4O95801 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TTC4O95801 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.94■■□□□ 1.1
TTC4O95801 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.94■■□□□ 1.1
TTC4O95801 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.94■■□□□ 1.1
TTC4O95801 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TTC4O95801 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
TTC4O95801 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
TTC4O95801 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TTC4O95801 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TTC4O95801 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms