Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.32■□□□□ 0.52
TSPAN9O75954 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN9O75954 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TSPAN9O75954 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN9O75954 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.32■□□□□ 0.52
TSPAN9O75954 AC005837.3-201ENST00000612163 286 ntBASIC18.32■□□□□ 0.52
TSPAN9O75954 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN9O75954 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.32■□□□□ 0.52
TSPAN9O75954 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN9O75954 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN9O75954 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN9O75954 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN9O75954 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN9O75954 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN9O75954 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.32■□□□□ 0.52
TSPAN9O75954 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN9O75954 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.32■□□□□ 0.52
TSPAN9O75954 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN9O75954 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN9O75954 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TSPAN9O75954 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.31■□□□□ 0.52
TSPAN9O75954 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.31■□□□□ 0.52
TSPAN9O75954 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN9O75954 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN9O75954 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN9O75954 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN9O75954 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN9O75954 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.31■□□□□ 0.52
TSPAN9O75954 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN9O75954 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN9O75954 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN9O75954 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN9O75954 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN9O75954 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN9O75954 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
TSPAN9O75954 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TSPAN9O75954 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.3■□□□□ 0.52
TSPAN9O75954 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TSPAN9O75954 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TSPAN9O75954 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TSPAN9O75954 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.3■□□□□ 0.52
TSPAN9O75954 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TSPAN9O75954 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TSPAN9O75954 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TSPAN9O75954 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.3■□□□□ 0.52
TSPAN9O75954 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TSPAN9O75954 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN9O75954 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN9O75954 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TSPAN9O75954 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN9O75954 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN9O75954 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN9O75954 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TSPAN9O75954 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.29■□□□□ 0.52
TSPAN9O75954 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.29■□□□□ 0.52
TSPAN9O75954 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN9O75954 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN9O75954 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN9O75954 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN9O75954 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.29■□□□□ 0.52
TSPAN9O75954 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.29■□□□□ 0.52
TSPAN9O75954 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.29■□□□□ 0.52
TSPAN9O75954 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.29■□□□□ 0.52
TSPAN9O75954 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN9O75954 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.29■□□□□ 0.52
TSPAN9O75954 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN9O75954 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN9O75954 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN9O75954 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN9O75954 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN9O75954 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN9O75954 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN9O75954 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN9O75954 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN9O75954 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TSPAN9O75954 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN9O75954 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN9O75954 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN9O75954 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.28■□□□□ 0.52
TSPAN9O75954 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.28■□□□□ 0.52
TSPAN9O75954 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.28■□□□□ 0.52
TSPAN9O75954 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.28■□□□□ 0.52
TSPAN9O75954 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.28■□□□□ 0.52
TSPAN9O75954 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.28■□□□□ 0.52
TSPAN9O75954 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.28■□□□□ 0.52
TSPAN9O75954 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN9O75954 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN9O75954 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TSPAN9O75954 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.28■□□□□ 0.52
TSPAN9O75954 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN9O75954 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN9O75954 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN9O75954 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.27■□□□□ 0.52
TSPAN9O75954 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TSPAN9O75954 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
TSPAN9O75954 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.27■□□□□ 0.52
TSPAN9O75954 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TSPAN9O75954 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TSPAN9O75954 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TSPAN9O75954 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms