Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SUPT3HO75486 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SUPT3HO75486 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
SUPT3HO75486 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.2■□□□□ 0.98
SUPT3HO75486 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
SUPT3HO75486 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.2■□□□□ 0.98
SUPT3HO75486 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SUPT3HO75486 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SUPT3HO75486 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SUPT3HO75486 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SUPT3HO75486 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.2■□□□□ 0.98
SUPT3HO75486 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SUPT3HO75486 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.2■□□□□ 0.98
SUPT3HO75486 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SUPT3HO75486 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SUPT3HO75486 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SUPT3HO75486 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SUPT3HO75486 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SUPT3HO75486 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SUPT3HO75486 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SUPT3HO75486 SYT6-210ENST00000641643 1587 ntBASIC21.19■□□□□ 0.98
SUPT3HO75486 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SUPT3HO75486 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SUPT3HO75486 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SUPT3HO75486 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SUPT3HO75486 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SUPT3HO75486 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.19■□□□□ 0.98
SUPT3HO75486 AC010525.1-201ENST00000585559 441 ntBASIC21.19■□□□□ 0.98
SUPT3HO75486 AC087239.1-201ENST00000622671 572 ntBASIC21.19■□□□□ 0.98
SUPT3HO75486 AC068587.7-201ENST00000641602 218 ntBASIC21.19■□□□□ 0.98
SUPT3HO75486 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SUPT3HO75486 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.18■□□□□ 0.98
SUPT3HO75486 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SUPT3HO75486 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SUPT3HO75486 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.18■□□□□ 0.98
SUPT3HO75486 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SUPT3HO75486 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.18■□□□□ 0.98
SUPT3HO75486 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.18■□□□□ 0.98
SUPT3HO75486 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.18■□□□□ 0.98
SUPT3HO75486 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SUPT3HO75486 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.18■□□□□ 0.98
SUPT3HO75486 SERBP1P1-201ENST00000396021 1160 ntBASIC21.18■□□□□ 0.98
SUPT3HO75486 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.18■□□□□ 0.98
SUPT3HO75486 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SUPT3HO75486 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SUPT3HO75486 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
SUPT3HO75486 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SUPT3HO75486 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SUPT3HO75486 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.17■□□□□ 0.98
SUPT3HO75486 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SUPT3HO75486 AC131281.2-201ENST00000520478 145 ntBASIC21.17■□□□□ 0.98
SUPT3HO75486 OR7E47P-201ENST00000546390 1422 ntBASIC21.17■□□□□ 0.98
SUPT3HO75486 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
SUPT3HO75486 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SUPT3HO75486 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.17■□□□□ 0.98
SUPT3HO75486 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SUPT3HO75486 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SUPT3HO75486 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SUPT3HO75486 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SUPT3HO75486 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SUPT3HO75486 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.16■□□□□ 0.98
SUPT3HO75486 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SUPT3HO75486 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SUPT3HO75486 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SUPT3HO75486 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SUPT3HO75486 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.16■□□□□ 0.98
SUPT3HO75486 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SUPT3HO75486 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.16■□□□□ 0.98
SUPT3HO75486 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SUPT3HO75486 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.16■□□□□ 0.98
SUPT3HO75486 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SUPT3HO75486 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SUPT3HO75486 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SUPT3HO75486 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SUPT3HO75486 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SUPT3HO75486 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.15■□□□□ 0.98
SUPT3HO75486 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SUPT3HO75486 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SUPT3HO75486 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SUPT3HO75486 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.15■□□□□ 0.98
SUPT3HO75486 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SUPT3HO75486 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
SUPT3HO75486 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.15■□□□□ 0.98
SUPT3HO75486 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SUPT3HO75486 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SUPT3HO75486 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SUPT3HO75486 DUX4L19-201ENST00000557448 1267 ntBASIC21.15■□□□□ 0.98
SUPT3HO75486 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.15■□□□□ 0.98
SUPT3HO75486 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SUPT3HO75486 AL137060.1-201ENST00000618151 2648 ntBASIC21.15■□□□□ 0.98
SUPT3HO75486 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SUPT3HO75486 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SUPT3HO75486 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.14■□□□□ 0.98
SUPT3HO75486 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SUPT3HO75486 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.14■□□□□ 0.97
SUPT3HO75486 AL138724.1-201ENST00000606771 1088 ntBASIC21.14■□□□□ 0.97
SUPT3HO75486 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.14■□□□□ 0.97
SUPT3HO75486 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SUPT3HO75486 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.14■□□□□ 0.97
SUPT3HO75486 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms