Protein–RNA interactions for Protein: O60423

ATP8B3, Phospholipid-transporting ATPase IK, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP8B3O60423 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ATP8B3O60423 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATP8B3O60423 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.21■■□□□ 1.31
ATP8B3O60423 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.2■■□□□ 1.31
ATP8B3O60423 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP8B3O60423 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP8B3O60423 MIR572-201ENST00000384983 95 ntBASIC23.2■■□□□ 1.3
ATP8B3O60423 AC010141.3-201ENST00000456659 717 ntBASIC23.2■■□□□ 1.3
ATP8B3O60423 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.2■■□□□ 1.3
ATP8B3O60423 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.2■■□□□ 1.3
ATP8B3O60423 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP8B3O60423 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ATP8B3O60423 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.2■■□□□ 1.3
ATP8B3O60423 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ATP8B3O60423 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP8B3O60423 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP8B3O60423 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.2■■□□□ 1.3
ATP8B3O60423 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP8B3O60423 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP8B3O60423 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP8B3O60423 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP8B3O60423 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP8B3O60423 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP8B3O60423 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.19■■□□□ 1.3
ATP8B3O60423 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP8B3O60423 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
ATP8B3O60423 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
ATP8B3O60423 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP8B3O60423 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP8B3O60423 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
ATP8B3O60423 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
ATP8B3O60423 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.18■■□□□ 1.3
ATP8B3O60423 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.18■■□□□ 1.3
ATP8B3O60423 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP8B3O60423 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP8B3O60423 FAM99A-202ENST00000538190 1989 ntBASIC23.18■■□□□ 1.3
ATP8B3O60423 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ATP8B3O60423 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP8B3O60423 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP8B3O60423 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP8B3O60423 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
ATP8B3O60423 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
ATP8B3O60423 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP8B3O60423 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP8B3O60423 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP8B3O60423 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.17■■□□□ 1.3
ATP8B3O60423 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.17■■□□□ 1.3
ATP8B3O60423 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATP8B3O60423 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATP8B3O60423 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.17■■□□□ 1.3
ATP8B3O60423 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP8B3O60423 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
ATP8B3O60423 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP8B3O60423 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.17■■□□□ 1.3
ATP8B3O60423 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.17■■□□□ 1.3
ATP8B3O60423 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
ATP8B3O60423 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP8B3O60423 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP8B3O60423 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP8B3O60423 AC244015.2-201ENST00000616358 1861 ntBASIC23.16■■□□□ 1.3
ATP8B3O60423 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.16■■□□□ 1.3
ATP8B3O60423 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.16■■□□□ 1.3
ATP8B3O60423 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP8B3O60423 AL358852.1-201ENST00000623174 1268 ntBASIC23.16■■□□□ 1.3
ATP8B3O60423 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.16■■□□□ 1.3
ATP8B3O60423 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP8B3O60423 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP8B3O60423 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
ATP8B3O60423 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
ATP8B3O60423 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP8B3O60423 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
ATP8B3O60423 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.15■■□□□ 1.3
ATP8B3O60423 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.15■■□□□ 1.3
ATP8B3O60423 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP8B3O60423 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.15■■□□□ 1.3
ATP8B3O60423 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.15■■□□□ 1.3
ATP8B3O60423 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.15■■□□□ 1.3
ATP8B3O60423 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP8B3O60423 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.15■■□□□ 1.3
ATP8B3O60423 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ATP8B3O60423 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.15■■□□□ 1.3
ATP8B3O60423 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP8B3O60423 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.15■■□□□ 1.3
ATP8B3O60423 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP8B3O60423 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP8B3O60423 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
ATP8B3O60423 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
ATP8B3O60423 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
ATP8B3O60423 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ATP8B3O60423 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
ATP8B3O60423 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.14■■□□□ 1.3
ATP8B3O60423 AC012414.1-201ENST00000556676 535 ntBASIC23.14■■□□□ 1.3
ATP8B3O60423 AL354811.1-201ENST00000610286 706 ntBASIC23.14■■□□□ 1.3
ATP8B3O60423 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP8B3O60423 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.14■■□□□ 1.29
ATP8B3O60423 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP8B3O60423 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.13■■□□□ 1.29
ATP8B3O60423 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP8B3O60423 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP8B3O60423 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms