Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.8■□□□□ 0.92
PEX1O43933 ALDH1A3-203ENST00000557963 1670 ntBASIC20.8■□□□□ 0.92
PEX1O43933 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PEX1O43933 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PEX1O43933 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.79■□□□□ 0.92
PEX1O43933 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.79■□□□□ 0.92
PEX1O43933 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PEX1O43933 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
PEX1O43933 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PEX1O43933 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PEX1O43933 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
PEX1O43933 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PEX1O43933 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PEX1O43933 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PEX1O43933 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.79■□□□□ 0.92
PEX1O43933 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PEX1O43933 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PEX1O43933 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PEX1O43933 AL136162.1-201ENST00000607711 1078 ntBASIC20.79■□□□□ 0.92
PEX1O43933 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PEX1O43933 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PEX1O43933 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.79■□□□□ 0.92
PEX1O43933 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PEX1O43933 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PEX1O43933 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PEX1O43933 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PEX1O43933 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PEX1O43933 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PEX1O43933 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PEX1O43933 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
PEX1O43933 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PEX1O43933 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PEX1O43933 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PEX1O43933 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PEX1O43933 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PEX1O43933 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.78■□□□□ 0.92
PEX1O43933 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.78■□□□□ 0.92
PEX1O43933 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.78■□□□□ 0.92
PEX1O43933 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PEX1O43933 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PEX1O43933 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PEX1O43933 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.78■□□□□ 0.92
PEX1O43933 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PEX1O43933 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PEX1O43933 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PEX1O43933 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.77■□□□□ 0.92
PEX1O43933 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PEX1O43933 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PEX1O43933 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PEX1O43933 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PEX1O43933 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
PEX1O43933 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PEX1O43933 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PEX1O43933 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PEX1O43933 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PEX1O43933 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.77■□□□□ 0.92
PEX1O43933 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PEX1O43933 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PEX1O43933 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PEX1O43933 AC009102.2-201ENST00000606772 1639 ntBASIC20.77■□□□□ 0.92
PEX1O43933 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PEX1O43933 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PEX1O43933 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
PEX1O43933 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PEX1O43933 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PEX1O43933 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PEX1O43933 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PEX1O43933 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PEX1O43933 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PEX1O43933 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.76■□□□□ 0.91
PEX1O43933 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PEX1O43933 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.76■□□□□ 0.91
PEX1O43933 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.76■□□□□ 0.91
PEX1O43933 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.76■□□□□ 0.91
PEX1O43933 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.76■□□□□ 0.91
PEX1O43933 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.76■□□□□ 0.91
PEX1O43933 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PEX1O43933 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PEX1O43933 AC135279.3-201ENST00000610945 1311 ntBASIC20.76■□□□□ 0.91
PEX1O43933 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.76■□□□□ 0.91
PEX1O43933 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.75■□□□□ 0.91
PEX1O43933 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PEX1O43933 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PEX1O43933 AC244015.2-201ENST00000616358 1861 ntBASIC20.75■□□□□ 0.91
PEX1O43933 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PEX1O43933 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.75■□□□□ 0.91
PEX1O43933 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PEX1O43933 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.75■□□□□ 0.91
PEX1O43933 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.75■□□□□ 0.91
PEX1O43933 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PEX1O43933 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.75■□□□□ 0.91
PEX1O43933 DUX4L19-201ENST00000557448 1267 ntBASIC20.75■□□□□ 0.91
PEX1O43933 AC092171.4-201ENST00000609130 632 ntBASIC20.75■□□□□ 0.91
PEX1O43933 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PEX1O43933 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.75■□□□□ 0.91
PEX1O43933 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PEX1O43933 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PEX1O43933 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PEX1O43933 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PEX1O43933 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms