Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
XRCC2O43543 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.64■□□□□ 0.57
XRCC2O43543 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
XRCC2O43543 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
XRCC2O43543 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
XRCC2O43543 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
XRCC2O43543 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.63■□□□□ 0.57
XRCC2O43543 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
XRCC2O43543 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.63■□□□□ 0.57
XRCC2O43543 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.63■□□□□ 0.57
XRCC2O43543 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
XRCC2O43543 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
XRCC2O43543 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
XRCC2O43543 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.63■□□□□ 0.57
XRCC2O43543 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
XRCC2O43543 AC233992.3-201ENST00000607491 485 ntBASIC18.63■□□□□ 0.57
XRCC2O43543 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
XRCC2O43543 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
XRCC2O43543 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.63■□□□□ 0.57
XRCC2O43543 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
XRCC2O43543 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
XRCC2O43543 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
XRCC2O43543 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
XRCC2O43543 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
XRCC2O43543 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.62■□□□□ 0.57
XRCC2O43543 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.62■□□□□ 0.57
XRCC2O43543 AC096631.2-201ENST00000436136 790 ntBASIC18.62■□□□□ 0.57
XRCC2O43543 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.62■□□□□ 0.57
XRCC2O43543 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
XRCC2O43543 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.62■□□□□ 0.57
XRCC2O43543 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.62■□□□□ 0.57
XRCC2O43543 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
XRCC2O43543 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
XRCC2O43543 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
XRCC2O43543 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.62■□□□□ 0.57
XRCC2O43543 FBXW4P1-201ENST00000426721 2239 ntBASIC18.62■□□□□ 0.57
XRCC2O43543 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
XRCC2O43543 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
XRCC2O43543 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.61■□□□□ 0.57
XRCC2O43543 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
XRCC2O43543 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
XRCC2O43543 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.61■□□□□ 0.57
XRCC2O43543 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
XRCC2O43543 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.61■□□□□ 0.57
XRCC2O43543 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.61■□□□□ 0.57
XRCC2O43543 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.61■□□□□ 0.57
XRCC2O43543 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
XRCC2O43543 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
XRCC2O43543 AC007375.3-201ENST00000600936 2314 ntBASIC18.61■□□□□ 0.57
XRCC2O43543 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
XRCC2O43543 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.6■□□□□ 0.57
XRCC2O43543 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
XRCC2O43543 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.6■□□□□ 0.57
XRCC2O43543 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
XRCC2O43543 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
XRCC2O43543 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.6■□□□□ 0.57
XRCC2O43543 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.6■□□□□ 0.57
XRCC2O43543 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
XRCC2O43543 PBX2P1-201ENST00000493219 1291 ntBASIC18.6■□□□□ 0.57
XRCC2O43543 AC126544.1-201ENST00000580842 1059 ntBASIC18.6■□□□□ 0.57
XRCC2O43543 AC106739.1-201ENST00000617035 715 ntBASIC18.6■□□□□ 0.57
XRCC2O43543 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.6■□□□□ 0.57
XRCC2O43543 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
XRCC2O43543 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.6■□□□□ 0.57
XRCC2O43543 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
XRCC2O43543 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
XRCC2O43543 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
XRCC2O43543 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
XRCC2O43543 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
XRCC2O43543 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
XRCC2O43543 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
XRCC2O43543 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
XRCC2O43543 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
XRCC2O43543 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
XRCC2O43543 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
XRCC2O43543 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.59■□□□□ 0.57
XRCC2O43543 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.59■□□□□ 0.57
XRCC2O43543 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.59■□□□□ 0.57
XRCC2O43543 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.59■□□□□ 0.57
XRCC2O43543 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.59■□□□□ 0.57
XRCC2O43543 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.59■□□□□ 0.57
XRCC2O43543 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
XRCC2O43543 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
XRCC2O43543 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
XRCC2O43543 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
XRCC2O43543 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
XRCC2O43543 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
XRCC2O43543 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
XRCC2O43543 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
XRCC2O43543 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
XRCC2O43543 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.59■□□□□ 0.57
XRCC2O43543 AC010542.4-201ENST00000563151 1910 ntBASIC18.59■□□□□ 0.57
XRCC2O43543 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
XRCC2O43543 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
XRCC2O43543 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
XRCC2O43543 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.58■□□□□ 0.56
XRCC2O43543 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
XRCC2O43543 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.58■□□□□ 0.56
XRCC2O43543 AC027682.1-201ENST00000562846 899 ntBASIC18.58■□□□□ 0.56
XRCC2O43543 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms