Protein–RNA interactions for Protein: O43294

TGFB1I1, Transforming growth factor beta-1-induced transcript 1 protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1I1O43294 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TGFB1I1O43294 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.54■■□□□ 1.36
TGFB1I1O43294 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TGFB1I1O43294 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.54■■□□□ 1.36
TGFB1I1O43294 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.53■■□□□ 1.36
TGFB1I1O43294 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.53■■□□□ 1.36
TGFB1I1O43294 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.53■■□□□ 1.36
TGFB1I1O43294 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
TGFB1I1O43294 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TGFB1I1O43294 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
TGFB1I1O43294 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.53■■□□□ 1.36
TGFB1I1O43294 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.53■■□□□ 1.36
TGFB1I1O43294 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.53■■□□□ 1.36
TGFB1I1O43294 FBXW4P1-201ENST00000426721 2239 ntBASIC23.53■■□□□ 1.36
TGFB1I1O43294 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.53■■□□□ 1.36
TGFB1I1O43294 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.53■■□□□ 1.36
TGFB1I1O43294 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TGFB1I1O43294 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
TGFB1I1O43294 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.52■■□□□ 1.36
TGFB1I1O43294 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
TGFB1I1O43294 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.52■■□□□ 1.36
TGFB1I1O43294 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
TGFB1I1O43294 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TGFB1I1O43294 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TGFB1I1O43294 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TGFB1I1O43294 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.52■■□□□ 1.36
TGFB1I1O43294 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.52■■□□□ 1.36
TGFB1I1O43294 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.52■■□□□ 1.36
TGFB1I1O43294 AC012414.1-201ENST00000556676 535 ntBASIC23.52■■□□□ 1.36
TGFB1I1O43294 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TGFB1I1O43294 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TGFB1I1O43294 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
TGFB1I1O43294 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
TGFB1I1O43294 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TGFB1I1O43294 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TGFB1I1O43294 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TGFB1I1O43294 AL034346.1-201ENST00000568244 1277 ntBASIC23.51■■□□□ 1.35
TGFB1I1O43294 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TGFB1I1O43294 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TGFB1I1O43294 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TGFB1I1O43294 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TGFB1I1O43294 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TGFB1I1O43294 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
TGFB1I1O43294 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TGFB1I1O43294 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.5■■□□□ 1.35
TGFB1I1O43294 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
TGFB1I1O43294 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
TGFB1I1O43294 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TGFB1I1O43294 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TGFB1I1O43294 IRS3P-201ENST00000223076 1006 ntBASIC23.5■■□□□ 1.35
TGFB1I1O43294 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.5■■□□□ 1.35
TGFB1I1O43294 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TGFB1I1O43294 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.5■■□□□ 1.35
TGFB1I1O43294 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
TGFB1I1O43294 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TGFB1I1O43294 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TGFB1I1O43294 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
TGFB1I1O43294 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.49■■□□□ 1.35
TGFB1I1O43294 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TGFB1I1O43294 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TGFB1I1O43294 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TGFB1I1O43294 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TGFB1I1O43294 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.49■■□□□ 1.35
TGFB1I1O43294 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TGFB1I1O43294 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TGFB1I1O43294 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.49■■□□□ 1.35
TGFB1I1O43294 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TGFB1I1O43294 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.49■■□□□ 1.35
TGFB1I1O43294 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.49■■□□□ 1.35
TGFB1I1O43294 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.49■■□□□ 1.35
TGFB1I1O43294 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.49■■□□□ 1.35
TGFB1I1O43294 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.49■■□□□ 1.35
TGFB1I1O43294 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.49■■□□□ 1.35
TGFB1I1O43294 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.49■■□□□ 1.35
TGFB1I1O43294 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.49■■□□□ 1.35
TGFB1I1O43294 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.49■■□□□ 1.35
TGFB1I1O43294 BX005040.4-201ENST00000637145 1518 ntBASIC23.49■■□□□ 1.35
TGFB1I1O43294 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.48■■□□□ 1.35
TGFB1I1O43294 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
TGFB1I1O43294 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TGFB1I1O43294 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TGFB1I1O43294 ZNRF2P3-201ENST00000424200 374 ntBASIC23.48■■□□□ 1.35
TGFB1I1O43294 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
TGFB1I1O43294 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TGFB1I1O43294 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.48■■□□□ 1.35
TGFB1I1O43294 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.48■■□□□ 1.35
TGFB1I1O43294 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TGFB1I1O43294 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TGFB1I1O43294 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.48■■□□□ 1.35
TGFB1I1O43294 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.48■■□□□ 1.35
TGFB1I1O43294 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.47■■□□□ 1.35
TGFB1I1O43294 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.47■■□□□ 1.35
TGFB1I1O43294 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TGFB1I1O43294 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
TGFB1I1O43294 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TGFB1I1O43294 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TGFB1I1O43294 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TGFB1I1O43294 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TGFB1I1O43294 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TGFB1I1O43294 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms